RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	MFSD10	Q14728	455 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	SHH	Q15465	462 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	KIAA0753	Q2KHM9	967 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	TMEM199	Q8N511	208 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	C7orf31	Q8N865	590 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	BICD2	Q8TD16	824 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	GPR20	Q99678	358 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	C16orf70	Q9BSU1	422 aa		18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	NOC4L	Q9BVI4	516 aa	Known RBP	18.74	■□□□□ 0.59
CIRBP-233	ENST00000591622	SOX1	O00570	391 aa	Predicted RBP	18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	CDKL5	O76039	1030 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	CYP2C9	P11712	490 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	ARHGAP4	P98171	946 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	CEP55	Q53EZ4	464 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	C9orf50	Q5SZB4	431 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	CYP2W1	Q8TAV3	490 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	CRYGN	Q8WXF5	182 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	ALG1	Q9BT22	464 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	KCNH7	Q9NS40	1196 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	UMODL1	Q5DID0	1318 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	TRIOBP	Q9H2D6	2365 aa		18.73	■□□□□ 0.59
CIRBP-233	ENST00000591622	SCN10A	Q9Y5Y9	1956 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622		H3BRB1	525 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	LGALS2	P05162	132 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	CSF2RA	P15509	400 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	PPIG	Q13427	754 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	PTGIS	Q16647	500 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	GDF6	Q6KF10	455 aa	Predicted RBP	18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	TUT1	Q9H6E5	874 aa	Known RBP	18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	PKD2L1	Q9P0L9	805 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	HDAC6	Q9UBN7	1215 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	GTF2IRD1	Q9UHL9	959 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	NOD1	Q9Y239	953 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	TELO2	Q9Y4R8	837 aa		18.72	■□□□□ 0.59
CIRBP-233	ENST00000591622	LAMA3	Q16787	3333 aa		18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	MEIS1	O00470	390 aa		18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	CYP3A4	P08684	503 aa		18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	ZNF76	P36508	570 aa		18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	NLRP5	P59047	1200 aa		18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	SP4	Q02446	784 aa		18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	FAM177A1	Q8N128	213 aa	Predicted RBP	18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	WNT8A	Q9H1J5	351 aa		18.71	■□□□□ 0.59
CIRBP-233	ENST00000591622	AR	P10275	920 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	CCL23	P55773	120 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	ME3	Q16798	604 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	C16orf59	Q7L2K0	433 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	NIPA1	Q7RTP0	329 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	RASGRP4	Q8TDF6	673 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	LRCH3	Q96II8	777 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	AIFM3	Q96NN9	605 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	CTAGE1	Q96RT6	745 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	PCDHA4	Q9UN74	947 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	STK36	Q9NRP7	1315 aa		18.7	■□□□□ 0.58
CIRBP-233	ENST00000591622	FAM86B1	E9PN63	330 aa		18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	PITPNM1	O00562	1244 aa		18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	CTDNEP1	O95476	244 aa		18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	FAM86B2	P0C5J1	330 aa		18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	TCF7	P36402	384 aa	Predicted RBP	18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	UTP14C	Q5TAP6	766 aa	Known RBP	18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	NECAB1	Q8N987	351 aa		18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	SEPT1	Q8WYJ6	367 aa		18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	AGO4	Q9HCK5	861 aa	Known RBP	18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	IL23A	Q9NPF7	189 aa		18.69	■□□□□ 0.58
CIRBP-233	ENST00000591622	IGLV3-22	A0A075B6J6	115 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	GSTTP1	A0A1W2PQM5	241 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	LARGE1	O95461	756 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	BFSP2	Q13515	415 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	GALNT17	Q6IS24	598 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	TRIM50	Q86XT4	487 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	GTF3C6	Q969F1	213 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	SCLY	Q96I15	445 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	RNPC3	Q96LT9	517 aa	Known RBP	18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	SDF4	Q9BRK5	362 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	C22orf23	Q9BZE7	217 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	JPH1	Q9HDC5	661 aa	Predicted RBP	18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	SLC9A2	Q9UBY0	812 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	ZNF215	Q9UL58	517 aa	Predicted RBP	18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	NFASC	O94856	1347 aa		18.68	■□□□□ 0.58
CIRBP-233	ENST00000591622	ACR	P10323	421 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	ITGB3BP	Q13352	177 aa	Predicted RBP	18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	HIC1	Q14526	733 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	TMEM240	Q5SV17	173 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	PLA2G4D	Q86XP0	818 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	BLID	Q8IZY5	108 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	CCDC155	Q8N6L0	562 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	RETREG2	Q8NC44	543 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	DAGLB	Q8NCG7	672 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	KIF2C	Q99661	725 aa		18.67	■□□□□ 0.58
CIRBP-233	ENST00000591622	DTNB	O60941	627 aa		18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	SMIM10L2A	P0DMW4	78 aa		18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	SMIM10L2B	P0DMW5	78 aa		18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	HOXC8	P31273	242 aa		18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	CIITA	P33076	1130 aa		18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	RBM25	P49756	843 aa	Known RBP	18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	ZNF200	P98182	395 aa	Predicted RBP	18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	PTK7	Q13308	1070 aa		18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	NPY5R	Q15761	445 aa		18.66	■□□□□ 0.58
CIRBP-233	ENST00000591622	GPR153	Q6NV75	609 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms