RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 TRIML1Q8N9V2 468 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 SPATA20Q8TB22 786 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 ANP32BQ92688 251 aaKnown RBP20.31■□□□□ 0.84
CTDP1-205ENST00000590599 NUDT12Q9BQG2 462 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 NT5C3AQ9H0P0 336 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 CBX8Q9HC52 389 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 JADE2Q9NQC1 790 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 KCNH7Q9NS40 1196 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 MAN1B1Q9UKM7 699 aa20.31■□□□□ 0.84
CTDP1-205ENST00000590599 IPO5O00410 1097 aaKnown RBP20.3■□□□□ 0.84
CTDP1-205ENST00000590599 PSMD10O75832 226 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 MYL1P05976 194 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 NR3C2P08235 984 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 CASP1P29466 404 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 UVSSAQ2YD98 709 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 LRRC15Q8TF66 581 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 MTRQ99707 1265 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 BLZF1Q9H2G9 400 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 KBTBD4Q9NVX7 518 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 SAGE1Q9NXZ1 904 aa20.3■□□□□ 0.84
CTDP1-205ENST00000590599 ERVK-9P63128 1117 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 ERVK-24P63145 666 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 HYIQ5T013 277 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 IFNL1Q8IU54 200 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 DNERQ8NFT8 737 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 GSDMAQ96QA5 445 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 RIT2Q99578 217 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 TEKT3Q9BXF9 490 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 TESPA1A2RU30 521 aaPredicted RBP20.29■□□□□ 0.84
CTDP1-205ENST00000590599 AMPD3Q01432 767 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 SREBF2Q12772 1141 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 PPP2R5CQ13362 524 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 CUL4BQ13620 913 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 OTOP1Q7RTM1 612 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 VSIG10LQ86VR7 867 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 MROH8Q9H579 483 aa20.29■□□□□ 0.84
CTDP1-205ENST00000590599 MANSC4A6NHS7 340 aaPredicted RBP20.28■□□□□ 0.84
CTDP1-205ENST00000590599 POTEB2H3BUK9 544 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 CHMP2AO43633 222 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 SV2BQ7L1I2 683 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 NLRX1Q86UT6 975 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 LUZP1Q86V48 1076 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 FAM43AQ8N2R8 423 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 LARP4BQ92615 738 aaKnown RBP20.28■□□□□ 0.84
CTDP1-205ENST00000590599 RAD54LQ92698 747 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 PARK7Q99497 189 aaKnown RBP20.28■□□□□ 0.84
CTDP1-205ENST00000590599 AGO4Q9HCK5 861 aaKnown RBP20.28■□□□□ 0.84
CTDP1-205ENST00000590599 PKD2L1Q9P0L9 805 aa20.28■□□□□ 0.84
CTDP1-205ENST00000590599 POTEB3A0JP26 581 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 GCLCP48506 637 aaPredicted RBP20.27■□□□□ 0.84
CTDP1-205ENST00000590599 CCNA1P78396 465 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 MORC3Q14149 939 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 Q3C1V9 767 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 POTEBQ6S5H4 581 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.27■□□□□ 0.84
CTDP1-205ENST00000590599 SHCBP1Q8NEM2 672 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 GPRC5AQ8NFJ5 357 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 IWS1Q96ST2 819 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 BLOC1S4Q9NUP1 217 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 RMND1Q9NWS8 449 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 KIAA1024Q9UPX6 916 aa20.27■□□□□ 0.84
CTDP1-205ENST00000590599 BRCA2P51587 3418 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 MED24O75448 989 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 STAM2O75886 525 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 RPA1P27694 616 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 CNTN2Q02246 1040 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 KCTD2Q14681 263 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 ECM1Q16610 540 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 WDR78Q5VTH9 848 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 GPRASP2Q96D09 838 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 ADD3Q9UEY8 706 aaKnown RBP20.26■□□□□ 0.83
CTDP1-205ENST00000590599 DACH1Q9UI36 760 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 ZSWIM8A7E2V4 1837 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 BECN2A8MW95 431 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 RPN1P04843 607 aaKnown RBP20.26■□□□□ 0.83
CTDP1-205ENST00000590599 DHX8Q14562 1220 aaKnown RBP20.26■□□□□ 0.83
CTDP1-205ENST00000590599 CATSPER3Q86XQ3 398 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
CTDP1-205ENST00000590599 ZNF296Q8WUU4 475 aaPredicted RBP20.26■□□□□ 0.83
CTDP1-205ENST00000590599 MMP19Q99542 508 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 BPIFA3Q9BQP9 254 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 LRRC27Q9C0I9 530 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 UNC45AQ9H3U1 944 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 TBC1D22BQ9NU19 505 aa20.26■□□□□ 0.83
CTDP1-205ENST00000590599 POTEFA5A3E0 1075 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 GOLGA6L19H0YKK7 550 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 DDX39AO00148 427 aaKnown RBP20.25■□□□□ 0.83
CTDP1-205ENST00000590599 EML1O00423 815 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 ALDH5A1P51649 535 aaPredicted RBP20.25■□□□□ 0.83
CTDP1-205ENST00000590599 MCM6Q14566 821 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 GNPTABQ3T906 1256 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 POTEGQ6S5H5 508 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 KCNK18Q7Z418 384 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 ANKRD13CQ8N6S4 541 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 MLKLQ8NB16 471 aa20.25■□□□□ 0.83
CTDP1-205ENST00000590599 INPP4AQ96PE3 977 aaPredicted RBP20.25■□□□□ 0.83
CTDP1-205ENST00000590599 EIF2AK1Q9BQI3 630 aaKnown RBP20.25■□□□□ 0.83
CTDP1-205ENST00000590599 POLR3CQ9BUI4 534 aaPredicted RBP20.25■□□□□ 0.83
CTDP1-205ENST00000590599 TRIM9Q9C026 710 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms