RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 NBNO60934 754 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 FGAP02671 866 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 SUPT20HL2P0C7V6 817 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 ACTN1P12814 892 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 EDNRBP24530 442 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 WDR5P61964 334 aaKnown RBP9.02□□□□□ -0.97
VMP1-204ENST00000587259 HIC1Q14526 733 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 ARSIQ5FYB1 569 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 TBC1D10CQ8IV04 446 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 RETREG2Q8NC44 543 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 KAT2BQ92831 832 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 TNPO1Q92973 898 aaKnown RBP9.02□□□□□ -0.97
VMP1-204ENST00000587259 TAAR1Q96RJ0 339 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 ALG1Q9BT22 464 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 KRT23Q9C075 422 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 ADD3Q9UEY8 706 aaKnown RBP9.02□□□□□ -0.97
VMP1-204ENST00000587259 ANAPC4Q9UJX5 808 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 TANC1Q9C0D5 1861 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 NEDD4P46934 1319 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 TRIP12Q14669 1992 aaPredicted RBP9.01□□□□□ -0.97
VMP1-204ENST00000587259 PFKMP08237 780 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 MMP3P08254 477 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 ZNF286BP0CG31 522 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 TOP1P11387 765 aaKnown RBP9.01□□□□□ -0.97
VMP1-204ENST00000587259 HMGN5P82970 282 aaKnown RBP9.01□□□□□ -0.97
VMP1-204ENST00000587259 ZNF543Q08ER8 600 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 MMRN1Q13201 1228 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 SART3Q15020 963 aaKnown RBP9.01□□□□□ -0.97
VMP1-204ENST00000587259 VARS2Q5ST30 1063 aaKnown RBP9.01□□□□□ -0.97
VMP1-204ENST00000587259 NFRKBQ6P4R8 1299 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 Q6ZUG5 572 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 RGS22Q8NE09 1264 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 SCFD2Q8WU76 684 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 HLA-CQ95604 372 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 ZNF274Q96GC6 653 aaPredicted RBP9.01□□□□□ -0.97
VMP1-204ENST00000587259 TMEM87BQ96K49 555 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 OSBPL7Q9BZF2 842 aa9.01□□□□□ -0.97
VMP1-204ENST00000587259 BRWD1Q9NSI6 2320 aa9□□□□□ -0.97
VMP1-204ENST00000587259 BRD1O95696 1058 aa9□□□□□ -0.97
VMP1-204ENST00000587259 FGRP09769 529 aa9□□□□□ -0.97
VMP1-204ENST00000587259 EIF2AK2P19525 551 aaKnown RBP9□□□□□ -0.97
VMP1-204ENST00000587259 POU3F3P20264 500 aaPredicted RBP9□□□□□ -0.97
VMP1-204ENST00000587259 KCNJ6P48051 423 aa9□□□□□ -0.97
VMP1-204ENST00000587259 EVCP57679 992 aa9□□□□□ -0.97
VMP1-204ENST00000587259 ARHGAP1Q07960 439 aa9□□□□□ -0.97
VMP1-204ENST00000587259 TOB2Q14106 344 aaPredicted RBP9□□□□□ -0.97
VMP1-204ENST00000587259 MBTPS1Q14703 1052 aa9□□□□□ -0.97
VMP1-204ENST00000587259 AAK1Q2M2I8 961 aa9□□□□□ -0.97
VMP1-204ENST00000587259 CCDC62Q6P9F0 684 aa9□□□□□ -0.97
VMP1-204ENST00000587259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9□□□□□ -0.973e-6■■■■□ 19.8
VMP1-204ENST00000587259 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
VMP1-204ENST00000587259 GTF3C6Q969F1 213 aa9□□□□□ -0.97
VMP1-204ENST00000587259 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
VMP1-204ENST00000587259 C1QTNF1Q9BXJ1 281 aa9□□□□□ -0.97
VMP1-204ENST00000587259 SEZ6LQ9BYH1 1024 aa9□□□□□ -0.97
VMP1-204ENST00000587259 SUGCTQ9HAC7 445 aa9□□□□□ -0.97
VMP1-204ENST00000587259 HDAC6Q9UBN7 1215 aa9□□□□□ -0.97
VMP1-204ENST00000587259 ERICH2A1L162 156 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 CKBP12277 381 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 SELPP16109 830 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 RFC2P35250 354 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 RCAN1P53805 252 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 EXOSC10Q01780 885 aaKnown RBP8.99□□□□□ -0.97
VMP1-204ENST00000587259 BFSP2Q13515 415 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 CDC37Q16543 378 aaPredicted RBP8.99□□□□□ -0.97
VMP1-204ENST00000587259 ME3Q16798 604 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 TMEM31Q5JXX7 168 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 ZNF618Q5T7W0 954 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 CPLX2Q6PUV4 134 aaKnown RBP8.99□□□□□ -0.97
VMP1-204ENST00000587259 TRAF7Q6Q0C0 670 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 MFSD6Q6ZSS7 791 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 STOX1Q6ZVD7 989 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 CCDC83Q8IWF9 413 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 MB21D2Q8IYB1 491 aaPredicted RBP8.99□□□□□ -0.97
VMP1-204ENST00000587259 PHOSPHO2Q8TCD6 241 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 SYTL5Q8TDW5 730 aaPredicted RBP8.99□□□□□ -0.97
VMP1-204ENST00000587259 GPKOWQ92917 476 aaPredicted RBP eCLIP8.99□□□□□ -0.97
VMP1-204ENST00000587259 C17orf80Q9BSJ5 609 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 BCAS3Q9H6U6 928 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 VAT1LQ9HCJ6 419 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 TPCN1Q9ULQ1 816 aa8.99□□□□□ -0.97
VMP1-204ENST00000587259 LINC01553A4QN01 128 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 KIF28PB7ZC32 967 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 NKRFO15226 690 aaKnown RBP eCLIP8.98□□□□□ -0.97
VMP1-204ENST00000587259 STX6O43752 255 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 PFKFB2O60825 505 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 CDKL5O76039 1030 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 CSPG5O95196 566 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 BAG4O95429 457 aaKnown RBP8.98□□□□□ -0.97
VMP1-204ENST00000587259 GH1P01241 217 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 SNHG28P0DPA3 235 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 CPA1P15085 419 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 IL9P15248 144 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 KCNA5P22460 613 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 GJB2P29033 226 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 PSEN2P49810 448 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms