RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 MLXIPQ9HAP2 919 aa17.17■□□□□ 0.34
CDK5RAP3-226ENST00000583182 MUC6Q6W4X9 2439 aa17.17■□□□□ 0.34
CDK5RAP3-226ENST00000583182 ATG2AQ2TAZ0 1938 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 PALM3A6NDB9 673 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 GRXCR2A6NFK2 248 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 LGALS2P05162 132 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 SMIM10L2AP0DMW4 78 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 SMIM10L2BP0DMW5 78 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 CYB5R4Q7L1T6 521 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 SAMD3Q8N6K7 520 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 NEK9Q8TD19 979 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 TOP1MTQ969P6 601 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 MYO7AQ13402 2215 aa17.16■□□□□ 0.34
CDK5RAP3-226ENST00000583182 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 H3BQ06 376 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 CTSHP09668 335 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 CCND2P30279 289 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 SSTR3P32745 418 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 CHD1LQ86WJ1 897 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 HOMER1Q86YM7 354 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 SEPT8Q92599 483 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 SAMD11Q96NU1 681 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 YME1L1Q96TA2 773 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 IL25Q9H293 177 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 CTNNA3Q9UI47 895 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 COL4A6Q14031 1691 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 RALGAPA2Q2PPJ7 1873 aa17.15■□□□□ 0.34
CDK5RAP3-226ENST00000583182 PRR33A8MZF0 331 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 H3BNC9 293 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 GCOM1H8Y6P7 765 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 UPP2O95045 317 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 POLR2MP0CAP2 368 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 MRPS9P82933 396 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 GPM6BQ13491 265 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 PTPROQ16827 1216 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 BANK1Q8NDB2 785 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 PIGSQ96S52 555 aa17.14■□□□□ 0.33
CDK5RAP3-226ENST00000583182 HIP1O00291 1037 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 CYTH3O43739 400 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 GRM4Q14833 912 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 TIGD5Q53EQ6 642 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 TMEM192Q8IY95 271 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 RIOX1Q9H6W3 641 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 SETD4Q9NVD3 440 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 TELO2Q9Y4R8 837 aa17.13■□□□□ 0.33
CDK5RAP3-226ENST00000583182 NOP56O00567 594 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 CAND2O75155 1236 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 IGHDP01880 384 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 ICAM3P32942 547 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 NUCB1Q02818 461 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 COL19A1Q14993 1142 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 PUS10Q3MIT2 529 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 TRIM50Q86XT4 487 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 INPP4AQ96PE3 977 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 GPR20Q99678 358 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 USP26Q9BXU7 913 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 IFIH1Q9BYX4 1025 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 SENP2Q9HC62 589 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 C5orf42Q9H799 3197 aa17.12■□□□□ 0.33
CDK5RAP3-226ENST00000583182 KAT6AQ92794 2004 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 SPATA31C2B4DYI2 1134 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 ALADP13716 330 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 ADAM17P78536 824 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 GNPTABQ3T906 1256 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 METTL7BQ6UX53 244 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 CYFIP1Q7L576 1253 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 NSUN3Q9H649 340 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 RTEL1Q9NZ71 1219 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 PIEZO1Q92508 2521 aa17.11■□□□□ 0.33
CDK5RAP3-226ENST00000583182 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 TRAF1Q13077 416 aa17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 NEDD9Q14511 834 aa17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 FAM26DQ5JW98 314 aa17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-226ENST00000583182 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 POTEB3A0JP26 581 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 FIBPO43427 364 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 STAM2O75886 525 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 GNAT1P11488 350 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 LTBRP36941 435 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 ARHGAP4P98171 946 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 ZP2Q05996 745 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 UTP14CQ5TAP6 766 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 POTEBQ6S5H4 581 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 APBB2Q92870 758 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
CDK5RAP3-226ENST00000583182 DCXO43602 365 aa17.08■□□□□ 0.32
CDK5RAP3-226ENST00000583182 CHRNA1P02708 482 aa17.08■□□□□ 0.32
CDK5RAP3-226ENST00000583182 CTNNB1P35222 781 aa17.08■□□□□ 0.32
CDK5RAP3-226ENST00000583182 TROAPQ12815 778 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms