RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 GJD3Q8N144 294 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 MRPL38Q96DV4 380 aaKnown RBP18.76■□□□□ 0.59
SREBF1-221ENST00000583080 OSBPL3Q9H4L5 887 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 MUC6Q6W4X9 2439 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 NLRC5Q86WI3 1866 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-221ENST00000583080 PALM3A6NDB9 673 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-221ENST00000583080 H3BQ06 376 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-221ENST00000583080 H3BRB1 525 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 CCND2P30279 289 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 CHD1LQ86WJ1 897 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 PIGSQ96S52 555 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 TUT1Q9H6E5 874 aaKnown RBP18.75■□□□□ 0.59
SREBF1-221ENST00000583080 CNNM2Q9H8M5 875 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 MLXIPQ9HAP2 919 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 MAP3K20Q9NYL2 800 aaKnown RBP18.75■□□□□ 0.59
SREBF1-221ENST00000583080 TELO2Q9Y4R8 837 aa18.75■□□□□ 0.59
SREBF1-221ENST00000583080 ATG2AQ2TAZ0 1938 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 BAZ2BQ9UIF8 2168 aaKnown RBP18.74■□□□□ 0.59
SREBF1-221ENST00000583080 UPP2O95045 317 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 SSTR3P32745 418 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-221ENST00000583080 TRIM50Q86XT4 487 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 NEK9Q8TD19 979 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 SEPT8Q92599 483 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 YME1L1Q96TA2 773 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 RNPEPQ9H4A4 650 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 SENP2Q9HC62 589 aa18.74■□□□□ 0.59
SREBF1-221ENST00000583080 GRXCR2A6NFK2 248 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 GCOM1H8Y6P7 765 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-221ENST00000583080 POLR2MP0CAP2 368 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 TGFB3P10600 412 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 MRPS9P82933 396 aaKnown RBP18.73■□□□□ 0.59
SREBF1-221ENST00000583080 NUCB1Q02818 461 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 SEMA3FQ13275 785 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 GRM4Q14833 912 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 PTPROQ16827 1216 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 TIGD5Q53EQ6 642 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 TCEAL5Q5H9L2 206 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 TOP1MTQ969P6 601 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 CTNNA3Q9UI47 895 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 FRMPD4Q14CM0 1322 aa18.73■□□□□ 0.59
SREBF1-221ENST00000583080 RALGAPA2Q2PPJ7 1873 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 H3BNC9 293 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 HIP1O00291 1037 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 NOP56O00567 594 aaKnown RBP18.72■□□□□ 0.59
SREBF1-221ENST00000583080 CYTH3O43739 400 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 IGHDP01880 384 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 GPM6BQ13491 265 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 TMEM192Q8IY95 271 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 BANK1Q8NDB2 785 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 SAMD11Q96NU1 681 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 RIOX1Q9H6W3 641 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 SETD4Q9NVD3 440 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 MYO7AQ13402 2215 aa18.72■□□□□ 0.59
SREBF1-221ENST00000583080 PRR33A8MZF0 331 aa18.71■□□□□ 0.59
SREBF1-221ENST00000583080 CYFIP1Q7L576 1253 aa18.71■□□□□ 0.59
SREBF1-221ENST00000583080 SAMD3Q8N6K7 520 aa18.71■□□□□ 0.59
SREBF1-221ENST00000583080 INPP4AQ96PE3 977 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-221ENST00000583080 GPR20Q99678 358 aa18.71■□□□□ 0.59
SREBF1-221ENST00000583080 IFIH1Q9BYX4 1025 aaKnown RBP18.71■□□□□ 0.59
SREBF1-221ENST00000583080 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
SREBF1-221ENST00000583080 PIEZO1Q92508 2521 aa18.7■□□□□ 0.58
SREBF1-221ENST00000583080 CAND2O75155 1236 aa18.7■□□□□ 0.58
SREBF1-221ENST00000583080 COL19A1Q14993 1142 aa18.7■□□□□ 0.58
SREBF1-221ENST00000583080 METTL7BQ6UX53 244 aa18.7■□□□□ 0.58
SREBF1-221ENST00000583080 EP400NLQ6ZTU2 488 aa18.7■□□□□ 0.58
SREBF1-221ENST00000583080 LMBR1Q8WVP7 490 aa18.7■□□□□ 0.58
SREBF1-221ENST00000583080 RWDD1Q9H446 243 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-221ENST00000583080 RTEL1Q9NZ71 1219 aa18.7■□□□□ 0.58
SREBF1-221ENST00000583080 SPATA31C2B4DYI2 1134 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 ICAM3P32942 547 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 ADAM17P78536 824 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 SP4Q02446 784 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 GNPTABQ3T906 1256 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 UTP14CQ5TAP6 766 aaKnown RBP18.69■□□□□ 0.58
SREBF1-221ENST00000583080 PIBF1Q8WXW3 757 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 PABPC5Q96DU9 382 aaKnown RBP18.69■□□□□ 0.58
SREBF1-221ENST00000583080 USP26Q9BXU7 913 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 NSUN3Q9H649 340 aaKnown RBP18.69■□□□□ 0.58
SREBF1-221ENST00000583080 TAF6LQ9Y6J9 622 aa18.69■□□□□ 0.58
SREBF1-221ENST00000583080 PNMA6FA0A0J9YX94 578 aa18.68■□□□□ 0.58
SREBF1-221ENST00000583080 LINC00271P0C7V0 271 aa18.68■□□□□ 0.58
SREBF1-221ENST00000583080 ARHGAP4P98171 946 aa18.68■□□□□ 0.58
SREBF1-221ENST00000583080 ZP2Q05996 745 aa18.68■□□□□ 0.58
SREBF1-221ENST00000583080 NEDD9Q14511 834 aa18.68■□□□□ 0.58
SREBF1-221ENST00000583080 PUS10Q3MIT2 529 aaKnown RBP18.68■□□□□ 0.58
SREBF1-221ENST00000583080 UIMC1Q96RL1 719 aa18.68■□□□□ 0.58
SREBF1-221ENST00000583080 CLDND1Q9NY35 253 aa18.68■□□□□ 0.58
SREBF1-221ENST00000583080 IFIT3O14879 490 aaKnown RBP18.67■□□□□ 0.58
SREBF1-221ENST00000583080 FIBPO43427 364 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 CHRNA1P02708 482 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 CTNNB1P35222 781 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 TROAPQ12815 778 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 FAM26DQ5JW98 314 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 RUFY4Q6ZNE9 571 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 RPAINQ86UA6 219 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 APBB2Q92870 758 aa18.67■□□□□ 0.58
SREBF1-221ENST00000583080 RC3H2Q9HBD1 1191 aaKnown RBP18.67■□□□□ 0.58
SREBF1-221ENST00000583080 ZNF215Q9UL58 517 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-221ENST00000583080 DCXO43602 365 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms