RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 PRDM6Q9NQX0 595 aa10.21□□□□□ -0.77
NUP85-217ENST00000581335 VCANP13611 3396 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 EIF3JO75822 258 aaKnown RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 MMP3P08254 477 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 CASTP20810 708 aaKnown RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 CHMP4BP1P59074 171 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 ARHGAP1Q07960 439 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 CCDC85BQ15834 202 aaPredicted RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 TMEM67Q5HYA8 995 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 SESTD1Q86VW0 696 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 PHOSPHO2Q8TCD6 241 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 ATXN2LQ8WWM7 1075 aaKnown RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 CALR3Q96L12 384 aaKnown RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 AMNQ9BXJ7 453 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 SLC4A5Q9BY07 1137 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 SPTBN5Q9NRC6 3674 aaKnown RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 DDX41Q9UJV9 622 aaKnown RBP10.2□□□□□ -0.78
NUP85-217ENST00000581335 NOD1Q9Y239 953 aa10.2□□□□□ -0.78
NUP85-217ENST00000581335 KLRF2D3W0D1 207 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 SNPHO15079 494 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 CFBP00751 764 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 NR3C2P08235 984 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 EIF2AK2P19525 551 aaKnown RBP10.19□□□□□ -0.78
NUP85-217ENST00000581335 HSD17B4P51659 736 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 GHRHRQ02643 423 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 SEC23AQ15436 765 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 PTGISQ16647 500 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 DGKDQ16760 1214 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 GDF6Q6KF10 455 aaPredicted RBP10.19□□□□□ -0.78
NUP85-217ENST00000581335 CYB5R4Q7L1T6 521 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 CHST3Q7LGC8 479 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 SAMD3Q8N6K7 520 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 CAGE1Q8TC20 777 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 KAT2BQ92831 832 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
NUP85-217ENST00000581335 MTMR8Q96EF0 704 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 SLC9A7Q96T83 725 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 FTOQ9C0B1 505 aaKnown RBP eCLIP10.19□□□□□ -0.78
NUP85-217ENST00000581335 IL25Q9H293 177 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 PXMP2Q9NR77 195 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 MAP3K20Q9NYL2 800 aaKnown RBP10.19□□□□□ -0.78
NUP85-217ENST00000581335 THEGQ9P2T0 379 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 MAD2L2Q9UI95 211 aa10.19□□□□□ -0.78
NUP85-217ENST00000581335 PTPRSQ13332 1948 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
NUP85-217ENST00000581335 OPLAHO14841 1288 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 ZBTB5O15062 677 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 BAIAP3O94812 1187 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 CA3P07451 260 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 PSEN2P49810 448 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 MRPS5P82675 430 aaKnown RBP10.18□□□□□ -0.78
NUP85-217ENST00000581335 LAMC2Q13753 1193 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 STOX1Q6ZVD7 989 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 DHX37Q8IY37 1157 aaKnown RBP10.18□□□□□ -0.78
NUP85-217ENST00000581335 AFAP1L1Q8TED9 768 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 RABGEF1Q9UJ41 708 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 MRVI1Q9Y6F6 885 aa10.18□□□□□ -0.78
NUP85-217ENST00000581335 REV3LO60673 3130 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 KIF28PB7ZC32 967 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 PPP1R11O60927 126 aaPredicted RBP10.17□□□□□ -0.78
NUP85-217ENST00000581335 PARNO95453 639 aaKnown RBP10.17□□□□□ -0.78
NUP85-217ENST00000581335 GSPT1P15170 499 aaKnown RBP10.17□□□□□ -0.78
NUP85-217ENST00000581335 POU3F3P20264 500 aaPredicted RBP10.17□□□□□ -0.78
NUP85-217ENST00000581335 TRDNQ13061 729 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 GPNMBQ14956 572 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 TTC22Q5TAA0 569 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 KCNV1Q6PIU1 500 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 HERC6Q8IVU3 1022 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 C7orf31Q8N865 590 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 TET1Q8NFU7 2136 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 PPTC7Q8NI37 304 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 RUFY2Q8WXA3 655 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 CTAGE1Q96RT6 745 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 PDCD2LQ9BRP1 358 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 ALG1Q9BT22 464 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 KATNAL1Q9BW62 490 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 RIOX1Q9H6W3 641 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 CHD7Q9P2D1 2997 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 HDAC6Q9UBN7 1215 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 GTF2IRD1Q9UHL9 959 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 PCDHA1Q9Y5I3 950 aa10.17□□□□□ -0.78
NUP85-217ENST00000581335 CUL9Q8IWT3 2517 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 ERICH2A1L162 156 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 HAS3O00219 553 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 RFXAPO00287 272 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 PPFIA4O75335 1185 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 RGS20O76081 388 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 F2P00734 622 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 CYP21A2P08686 494 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 TGFB3P10600 412 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 CKBP12277 381 aa10.16□□□□□ -0.78
NUP85-217ENST00000581335 MYCLP12524 364 aaPredicted RBP10.16□□□□□ -0.78
NUP85-217ENST00000581335 SELPP16109 830 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms