RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SEMA3FQ13275 785 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 SHHQ15465 462 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 NTRK3Q16288 839 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 PKN1Q16512 942 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 PTGISQ16647 500 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 C9orf50Q5SZB4 431 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 UTP14CQ5TAP6 766 aaKnown RBP12.44□□□□□ -0.42
NDEL1-208ENST00000580237 MCTP2Q6DN12 878 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 ZMYND12Q9H0C1 365 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 UBIAD1Q9Y5Z9 338 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 GBF1Q92538 1859 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 UMODL1Q5DID0 1318 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 WDR81Q562E7 1941 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 SOX1O00570 391 aaPredicted RBP12.43□□□□□ -0.42
NDEL1-208ENST00000580237 SLC34A2O95436 690 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 HOXD8P13378 290 aaPredicted RBP12.43□□□□□ -0.42
NDEL1-208ENST00000580237 NEK4P51957 841 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 ARHGAP4P98171 946 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 BFSP2Q13515 415 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 LRIT3Q3SXY7 679 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 PSRC1Q6PGN9 363 aaPredicted RBP12.43□□□□□ -0.42
NDEL1-208ENST00000580237 RETREG2Q8NC44 543 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 KAT2BQ92831 832 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 LRCH3Q96II8 777 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 SENP7Q9BQF6 1050 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 MXRA8Q9BRK3 442 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 MTIF3Q9H2K0 278 aaKnown RBP12.43□□□□□ -0.42
NDEL1-208ENST00000580237 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
NDEL1-208ENST00000580237 JADE2Q9NQC1 790 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 GTF2IRD1Q9UHL9 959 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 TCEAL9Q9UHQ7 104 aa12.43□□□□□ -0.42
NDEL1-208ENST00000580237 H3BRB1 525 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 SEC24BO95487 1268 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 KCNA2P16389 499 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 XBP1P17861 261 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 TCF7P36402 384 aaPredicted RBP12.42□□□□□ -0.42
NDEL1-208ENST00000580237 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
NDEL1-208ENST00000580237 EPHB4P54760 987 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 SCRN1Q12765 414 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 CEP55Q53EZ4 464 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
NDEL1-208ENST00000580237 SESTD1Q86VW0 696 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 GPR20Q99678 358 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 WNT8AQ9H1J5 351 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 TUT1Q9H6E5 874 aaKnown RBP12.42□□□□□ -0.42
NDEL1-208ENST00000580237 UPF2Q9HAU5 1272 aaKnown RBP12.42□□□□□ -0.42
NDEL1-208ENST00000580237 SH3GLB2Q9NR46 395 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 HDAC6Q9UBN7 1215 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
NDEL1-208ENST00000580237 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 MAFGO15525 162 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 ACRP10323 421 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 RANBP2P49792 3224 aaKnown RBP12.41□□□□□ -0.42
NDEL1-208ENST00000580237 SETQ01105 290 aaPredicted RBP12.41□□□□□ -0.42
NDEL1-208ENST00000580237 C8orf34Q49A92 452 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 PLA2G4DQ86XP0 818 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 GLG1Q92896 1179 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 SCLYQ96I15 445 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
NDEL1-208ENST00000580237 C16orf70Q9BSU1 422 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 BCAS3Q9H6U6 928 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 IL23AQ9NPF7 189 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 KCNH7Q9NS40 1196 aa12.41□□□□□ -0.42
NDEL1-208ENST00000580237 STK36Q9NRP7 1315 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 TET1Q8NFU7 2136 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 C17orf102A2RUQ5 167 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 DDX39AO00148 427 aaKnown RBP12.4□□□□□ -0.42
NDEL1-208ENST00000580237 HAS3O00219 553 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 PFKFB2O60825 505 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 ATP9AO75110 1047 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 SMIM10L2AP0DMW4 78 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 SMIM10L2BP0DMW5 78 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 DEFB128Q7Z7B8 93 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 RPUSD2Q8IZ73 545 aaKnown RBP12.4□□□□□ -0.42
NDEL1-208ENST00000580237 CYP2W1Q8TAV3 490 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 WASF1Q92558 559 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 C22orf23Q9BZE7 217 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 AZI2Q9H6S1 392 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 SLC9A2Q9UBY0 812 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 PCDHA4Q9UN74 947 aa12.4□□□□□ -0.42
NDEL1-208ENST00000580237 ZBBXA8MT70 800 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 PFKMP08237 780 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 ARP10275 920 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 GNAT1P11488 350 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 MARK3P27448 753 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 RFC2P35250 354 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 PRR16Q569H4 304 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 LRRC8DQ7L1W4 858 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 BLIDQ8IZY5 108 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
NDEL1-208ENST00000580237 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 AFAP1L1Q8TED9 768 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 SEPT1Q8WYJ6 367 aa12.39□□□□□ -0.43
NDEL1-208ENST00000580237 ATP6V0A1Q93050 837 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms