RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 SIP14410 1827 aa24.33■■□□□ 1.49
TSEN54-205ENST00000578415 LGALS2P05162 132 aa24.33■■□□□ 1.49
TSEN54-205ENST00000578415 SMIM10L2AP0DMW4 78 aa24.33■■□□□ 1.49
TSEN54-205ENST00000578415 SMIM10L2BP0DMW5 78 aa24.33■■□□□ 1.49
TSEN54-205ENST00000578415 SENP2Q9HC62 589 aa24.33■■□□□ 1.49
TSEN54-205ENST00000578415 MYH7BA7E2Y1 1941 aa24.33■■□□□ 1.49
TSEN54-205ENST00000578415 TREHO43280 583 aa24.32■■□□□ 1.48
TSEN54-205ENST00000578415 LEXMQ3ZCV2 418 aa24.32■■□□□ 1.48
TSEN54-205ENST00000578415 RNPEPQ9H4A4 650 aa24.32■■□□□ 1.48
TSEN54-205ENST00000578415 FRMPD4Q14CM0 1322 aa24.32■■□□□ 1.48
TSEN54-205ENST00000578415 KCNA5P22460 613 aa24.31■■□□□ 1.48
TSEN54-205ENST00000578415 MRPS9P82933 396 aaKnown RBP24.31■■□□□ 1.48
TSEN54-205ENST00000578415 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.31■■□□□ 1.48
TSEN54-205ENST00000578415 INPP4AQ96PE3 977 aaPredicted RBP24.31■■□□□ 1.48
TSEN54-205ENST00000578415 ARIH1Q9Y4X5 557 aaPredicted RBP24.31■■□□□ 1.48
TSEN54-205ENST00000578415 PNMA6FA0A0J9YX94 578 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 FAM86C2PA6NEL3 165 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 PI4K2BG5E9Z4 385 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 GPR37L1O60883 481 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 CTSHP09668 335 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 ICAM3P32942 547 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 TRAF1Q13077 416 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 SEMA3FQ13275 785 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 EPC2Q52LR7 807 aa24.3■■□□□ 1.48
TSEN54-205ENST00000578415 MRPL38Q96DV4 380 aaKnown RBP24.3■■□□□ 1.48
TSEN54-205ENST00000578415 MICAL3Q7RTP6 2002 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 SPATA31C2B4DYI2 1134 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 CAND2O75155 1236 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 TROAPQ12815 778 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 METTL7BQ6UX53 244 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 FAM178BQ8IXR5 827 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 SEPT8Q92599 483 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 TOP1MTQ969P6 601 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 USP26Q9BXU7 913 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 SETD4Q9NVD3 440 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 HCN4Q9Y3Q4 1203 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 TELO2Q9Y4R8 837 aa24.29■■□□□ 1.48
TSEN54-205ENST00000578415 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.28■■□□□ 1.48
TSEN54-205ENST00000578415 NOP56O00567 594 aaKnown RBP24.28■■□□□ 1.48
TSEN54-205ENST00000578415 IFIT3O14879 490 aaKnown RBP24.28■■□□□ 1.48
TSEN54-205ENST00000578415 CYP21A2P08686 494 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 TRDNQ13061 729 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 GNPTABQ3T906 1256 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 CYFIP1Q7L576 1253 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 TRIM50Q86XT4 487 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 SAMD11Q96NU1 681 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 YME1L1Q96TA2 773 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 GPR20Q99678 358 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 TAF6LQ9Y6J9 622 aa24.28■■□□□ 1.48
TSEN54-205ENST00000578415 STAM2O75886 525 aa24.27■■□□□ 1.48
TSEN54-205ENST00000578415 GSPT1P15170 499 aaKnown RBP24.27■■□□□ 1.48
TSEN54-205ENST00000578415 IL9P15248 144 aa24.27■■□□□ 1.48
TSEN54-205ENST00000578415 HOXD11P31277 338 aaPredicted RBP24.27■■□□□ 1.48
TSEN54-205ENST00000578415 NEDD9Q14511 834 aa24.27■■□□□ 1.48
TSEN54-205ENST00000578415 EXOC6Q8TAG9 804 aa24.27■■□□□ 1.48
TSEN54-205ENST00000578415 RTEL1Q9NZ71 1219 aa24.27■■□□□ 1.48
TSEN54-205ENST00000578415 ADAM17P78536 824 aa24.26■■□□□ 1.47
TSEN54-205ENST00000578415 PTH1RQ03431 593 aa24.26■■□□□ 1.47
TSEN54-205ENST00000578415 PTPROQ16827 1216 aa24.26■■□□□ 1.47
TSEN54-205ENST00000578415 GJD3Q8N144 294 aa24.26■■□□□ 1.47
TSEN54-205ENST00000578415 U3KPZ7 1027 aaPredicted RBP24.26■■□□□ 1.47
TSEN54-205ENST00000578415 COL4A6Q14031 1691 aa24.26■■□□□ 1.47
TSEN54-205ENST00000578415 BAZ2BQ9UIF8 2168 aaKnown RBP24.25■■□□□ 1.47
TSEN54-205ENST00000578415 H3BNC9 293 aa24.25■■□□□ 1.47
TSEN54-205ENST00000578415 FIBPO43427 364 aa24.25■■□□□ 1.47
TSEN54-205ENST00000578415 UPP2O95045 317 aa24.25■■□□□ 1.47
TSEN54-205ENST00000578415 WTAPQ15007 396 aa24.25■■□□□ 1.47
TSEN54-205ENST00000578415 TIGD5Q53EQ6 642 aa24.25■■□□□ 1.47
TSEN54-205ENST00000578415 PTCRAQ6ISU1 281 aaPredicted RBP24.25■■□□□ 1.47
TSEN54-205ENST00000578415 NEK9Q8TD19 979 aa24.25■■□□□ 1.47
TSEN54-205ENST00000578415 PIBF1Q8WXW3 757 aa24.25■■□□□ 1.47
TSEN54-205ENST00000578415 ERICH2A1L162 156 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 GRXCR2A6NFK2 248 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 GNAT1P11488 350 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 PDE4AP27815 886 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 GPM6BQ13491 265 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 FAM26DQ5JW98 314 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 TMEM192Q8IY95 271 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 BANK1Q8NDB2 785 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 LMBR1Q8WVP7 490 aa24.24■■□□□ 1.47
TSEN54-205ENST00000578415 IFIH1Q9BYX4 1025 aaKnown RBP24.24■■□□□ 1.47
TSEN54-205ENST00000578415 H3BQ06 376 aaPredicted RBP24.23■■□□□ 1.47
TSEN54-205ENST00000578415 ANTXR2P58335 489 aa24.23■■□□□ 1.47
TSEN54-205ENST00000578415 TCEAL5Q5H9L2 206 aa24.23■■□□□ 1.47
TSEN54-205ENST00000578415 TTC22Q5TAA0 569 aa24.23■■□□□ 1.47
TSEN54-205ENST00000578415 UTP14CQ5TAP6 766 aaKnown RBP24.23■■□□□ 1.47
TSEN54-205ENST00000578415 RALYLQ86SE5 291 aaKnown RBP24.23■■□□□ 1.47
TSEN54-205ENST00000578415 APBB2Q92870 758 aa24.23■■□□□ 1.47
TSEN54-205ENST00000578415 ZNF215Q9UL58 517 aaPredicted RBP24.23■■□□□ 1.47
TSEN54-205ENST00000578415 SUPT16HQ9Y5B9 1047 aaKnown RBP24.23■■□□□ 1.47
TSEN54-205ENST00000578415 E7EWF7 191 aa24.22■■□□□ 1.47
TSEN54-205ENST00000578415 ARHGAP4P98171 946 aa24.22■■□□□ 1.47
TSEN54-205ENST00000578415 SP4Q02446 784 aa24.22■■□□□ 1.47
TSEN54-205ENST00000578415 COL19A1Q14993 1142 aa24.22■■□□□ 1.47
TSEN54-205ENST00000578415 USP17L6PQ6QN14 398 aa24.22■■□□□ 1.47
TSEN54-205ENST00000578415 SENP7Q9BQF6 1050 aa24.22■■□□□ 1.47
TSEN54-205ENST00000578415 SSTR3P32745 418 aaPredicted RBP24.21■■□□□ 1.47
TSEN54-205ENST00000578415 SART3Q15020 963 aaKnown RBP24.21■■□□□ 1.47
TSEN54-205ENST00000578415 PCNX4Q63HM2 1172 aa24.21■■□□□ 1.47
TSEN54-205ENST00000578415 CATIPQ7Z7H3 387 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms