RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CYP4F22Q6NT55 531 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 ZNF449Q6P9G9 518 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 CTAGE3PQ8IX95 158 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 FAM178BQ8IXR5 827 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 TTLL11Q8NHH1 800 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 RAB21Q9UL25 225 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 CEP152O94986 1710 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 SLFN12Q8IYM2 578 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 MMGT1Q8N4V1 131 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 PDCD7Q8N8D1 485 aaKnown RBP14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 CCDC89Q8N998 374 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 FAM167BQ9BTA0 163 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 NRKQ7Z2Y5 1582 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 A0A0G2JLW4 131 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 SETSIPP0DME0 302 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 SRGNP10124 158 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 MAN1A1P33908 653 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 IRX4P78413 519 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 SGO2Q562F6 1265 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 GCNT4Q9P109 453 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 CDHR2Q9BYE9 1310 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 ACSL3O95573 720 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 ITIH3Q06033 890 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 SNX1Q13596 522 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 SCARF1Q14162 830 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 DDB1Q16531 1140 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 TRAPPC11Q7Z392 1133 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 PACS2Q86VP3 889 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 PPM1KQ8N3J5 372 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 MS4A14Q96JA4 679 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 ZC3H12CQ9C0D7 883 aaKnown RBP14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 CCDC87Q9NVE4 849 aa14.24□□□□□ -0.13
PCDHGB3-201ENST00000576222 FAM107AO95990 144 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 RPS8P62241 208 aaKnown RBP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 PTPAQ15257 358 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 TMED2Q15363 201 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 WDR78Q5VTH9 848 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 PITPNM3Q9BZ71 974 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 ZNF148Q9UQR1 794 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 PSMC4P43686 418 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 ERVK-24P63145 666 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 GRIN1Q05586 938 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 KCNB1Q14721 858 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 ATG9AQ7Z3C6 839 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 FAM186BQ8IYM0 893 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 ADSSL1Q8N142 457 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.23□□□□□ -0.131e-7■■■■■ 78
PCDHGB3-201ENST00000576222 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 RBM12Q9NTZ6 932 aaKnown RBP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 INO80Q9ULG1 1556 aaPredicted RBP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 CYP4A11Q02928 519 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 PFKFB3Q16875 520 aaPredicted RBP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 USH1GQ495M9 461 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 DPH6Q7L8W6 267 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 ENAHQ8N8S7 591 aaPredicted RBP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 IL17RAQ96F46 866 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 RNPC3Q96LT9 517 aaKnown RBP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 SLC40A1Q9NP59 571 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 SMARCAL1Q9NZC9 954 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 ANAPC5Q9UJX4 755 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 HPS5Q9UPZ3 1129 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 PP2D1A8MPX8 630 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 H0Y3Z8 333 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 PODXLO00592 558 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 MAPK13O15264 365 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 CARSP49589 748 aaKnown RBP14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 SEMA3FQ13275 785 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 STAG2Q8N3U4 1231 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 KCNV2Q8TDN2 545 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 IGDCC4Q8TDY8 1250 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 CYFIP2Q96F07 1278 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 AZI2Q9H6S1 392 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 SH2D4AQ9H788 454 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 TFR2Q9UP52 801 aa14.23□□□□□ -0.13
PCDHGB3-201ENST00000576222 LRRN2O75325 713 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 PMS2P54278 862 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 PTGISQ16647 500 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 FOXR1Q6PIV2 292 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 BATF3Q9NR55 127 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 CLIC2O15247 247 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 DAPK3O43293 454 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 PSMC2P35998 433 aaKnown RBP14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 NCAPD2Q15021 1401 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 ANKARQ7Z5J8 1434 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 NLRP10Q86W26 655 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 PROM2Q8N271 834 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 CD248Q9HCU0 757 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 ANKRD40Q6AI12 368 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 LRRC47Q8N1G4 583 aaKnown RBP14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 SEC16BQ96JE7 1060 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 SH3GLB2Q9NR46 395 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 HEG1Q9ULI3 1381 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 PVALEFA0A1B0GWK0 134 aa14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 ATF7P17544 494 aaPredicted RBP14.22□□□□□ -0.13
PCDHGB3-201ENST00000576222 MYL7Q01449 175 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms