RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
NDE1-203ENST00000570727 IKBKEQ14164 716 aa17.07■□□□□ 0.32
NDE1-203ENST00000570727 USP17L6PQ6QN14 398 aa17.07■□□□□ 0.32
NDE1-203ENST00000570727 SRBD1Q8N5C6 995 aaKnown RBP17.07■□□□□ 0.32
NDE1-203ENST00000570727 RAD9AQ99638 391 aa17.07■□□□□ 0.32
NDE1-203ENST00000570727 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
NDE1-203ENST00000570727 RNPEPQ9H4A4 650 aa17.07■□□□□ 0.32
NDE1-203ENST00000570727 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 TREHO43280 583 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 PRC1O43663 620 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 LGR5O75473 907 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 DDAH1O94760 285 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 SMIM10L2AP0DMW4 78 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 SMIM10L2BP0DMW5 78 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 THPOP40225 353 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 NEDD9Q14511 834 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 GNPTABQ3T906 1256 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 METTL7BQ6UX53 244 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
NDE1-203ENST00000570727 CYFIP1Q7L576 1253 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 DBF4BQ8NFT6 615 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 ATP6V0A1Q93050 837 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 RRP36Q96EU6 259 aaKnown RBP17.06■□□□□ 0.32
NDE1-203ENST00000570727 UHRF1Q96T88 793 aaPredicted RBP17.06■□□□□ 0.32
NDE1-203ENST00000570727 GPR20Q99678 358 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 MTA3Q9BTC8 594 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 USP26Q9BXU7 913 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 OSBPL7Q9BZF2 842 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
NDE1-203ENST00000570727 MICAL3Q7RTP6 2002 aa17.06■□□□□ 0.32
NDE1-203ENST00000570727 KAT6AQ92794 2004 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 RSPH10B2B2RC85 870 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 FIBPO43427 364 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 EFCAB14O75071 495 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 PLEKHA8P1O95397 391 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 RSPH10BP0C881 870 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 KIF5BP33176 963 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 SKIV2LQ15477 1246 aaKnown RBP17.05■□□□□ 0.32
NDE1-203ENST00000570727 PCNX4Q63HM2 1172 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 CTCFLQ8NI51 663 aaPredicted RBP17.05■□□□□ 0.32
NDE1-203ENST00000570727 SUGCTQ9HAC7 445 aa17.05■□□□□ 0.32
NDE1-203ENST00000570727 LINC01553A4QN01 128 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
NDE1-203ENST00000570727 SH2B2O14492 632 aaPredicted RBP17.04■□□□□ 0.32
NDE1-203ENST00000570727 MCM5P33992 734 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 KCNQ1P51787 676 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 ERVK-21P61565 698 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 PLEKHG4Q58EX7 1191 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 CMTR1Q8N1G2 835 aaKnown RBP17.04■□□□□ 0.32
NDE1-203ENST00000570727 TMTC2Q8N394 836 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 SMARCC2Q8TAQ2 1214 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
NDE1-203ENST00000570727 SENP7Q9BQF6 1050 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 SETD4Q9NVD3 440 aa17.04■□□□□ 0.32
NDE1-203ENST00000570727 COL4A4P53420 1690 aaPredicted RBP17.04■□□□□ 0.32
NDE1-203ENST00000570727 EMSYQ7Z589 1322 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 SLC27A2O14975 620 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 RXRAP19793 462 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 GNAQP50148 359 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 ADAM17P78536 824 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 NECTIN1Q15223 517 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 AAK1Q2M2I8 961 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 FAM117BQ6P1L5 589 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 XRRA1Q6P2D8 792 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 TRIM50Q86XT4 487 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 CUL5Q93034 780 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 TMEM87BQ96K49 555 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 TGS1Q96RS0 853 aaKnown RBP17.03■□□□□ 0.32
NDE1-203ENST00000570727 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 LMCD1Q9NZU5 365 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 BRWD1Q9NSI6 2320 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 SIP14410 1827 aa17.03■□□□□ 0.32
NDE1-203ENST00000570727 ATP9AO75110 1047 aa17.02■□□□□ 0.32
NDE1-203ENST00000570727 LIFRP42702 1097 aa17.02■□□□□ 0.32
NDE1-203ENST00000570727 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.32
NDE1-203ENST00000570727 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.32
NDE1-203ENST00000570727 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
NDE1-203ENST00000570727 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
NDE1-203ENST00000570727 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.32
NDE1-203ENST00000570727 COG5Q9UP83 839 aa17.02■□□□□ 0.32
NDE1-203ENST00000570727 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
NDE1-203ENST00000570727 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
NDE1-203ENST00000570727 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
NDE1-203ENST00000570727 LRRC2Q9BYS8 371 aa17.01■□□□□ 0.31
NDE1-203ENST00000570727 PSTPIP2Q9H939 334 aa17.01■□□□□ 0.31
NDE1-203ENST00000570727 MTUS1Q9ULD2 1270 aa17.01■□□□□ 0.31
NDE1-203ENST00000570727 INSL6Q9Y581 213 aa17.01■□□□□ 0.31
NDE1-203ENST00000570727 CAND2O75155 1236 aa17■□□□□ 0.31
NDE1-203ENST00000570727 AMHP03971 560 aa17■□□□□ 0.31
NDE1-203ENST00000570727 GNAT1P11488 350 aa17■□□□□ 0.31
NDE1-203ENST00000570727 KCNA2P16389 499 aa17■□□□□ 0.31
NDE1-203ENST00000570727 ITGB5P18084 799 aa17■□□□□ 0.31
NDE1-203ENST00000570727 SP4Q02446 784 aa17■□□□□ 0.31
NDE1-203ENST00000570727 FAM26DQ5JW98 314 aa17■□□□□ 0.31
NDE1-203ENST00000570727 NLRX1Q86UT6 975 aa17■□□□□ 0.31
NDE1-203ENST00000570727 RAB11FIP4Q86YS3 637 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms