RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 GPRASP2Q96D09 838 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 GPR20Q99678 358 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 TM6SF1Q9BZW5 370 aa28.97■■■□□ 2.23
CCNF-205ENST00000569093 CXXC1Q9P0U4 656 aaPredicted RBP28.97■■■□□ 2.23
CCNF-205ENST00000569093 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.96■■■□□ 2.23
CCNF-205ENST00000569093 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.96■■■□□ 2.23
CCNF-205ENST00000569093 GRXCR1A8MXD5 290 aa28.96■■■□□ 2.23
CCNF-205ENST00000569093 ADAMTS3O15072 1205 aa28.96■■■□□ 2.23
CCNF-205ENST00000569093 PRPF3O43395 683 aaKnown RBP28.96■■■□□ 2.23
CCNF-205ENST00000569093 ZNF200P98182 395 aaPredicted RBP28.96■■■□□ 2.23
CCNF-205ENST00000569093 DEFB128Q7Z7B8 93 aa28.96■■■□□ 2.23
CCNF-205ENST00000569093 RPUSD2Q8IZ73 545 aaKnown RBP28.96■■■□□ 2.23
CCNF-205ENST00000569093 RETREG2Q8NC44 543 aa28.96■■■□□ 2.23
CCNF-205ENST00000569093 SENP7Q9BQF6 1050 aa28.96■■■□□ 2.23
CCNF-205ENST00000569093 PKD2L1Q9P0L9 805 aa28.96■■■□□ 2.23
CCNF-205ENST00000569093 LGALS2P05162 132 aa28.95■■■□□ 2.22
CCNF-205ENST00000569093 IQCF3P0C7M6 154 aa28.95■■■□□ 2.22
CCNF-205ENST00000569093 HERVK_113Q902F9 699 aa28.95■■■□□ 2.22
CCNF-205ENST00000569093 DHX38Q92620 1227 aaKnown RBP28.95■■■□□ 2.22
CCNF-205ENST00000569093 ANO3Q9BYT9 981 aa28.95■■■□□ 2.22
CCNF-205ENST00000569093 JADE2Q9NQC1 790 aa28.95■■■□□ 2.22
CCNF-205ENST00000569093 H3BRB1 525 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 PITPNM1O00562 1244 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 KCNA2P16389 499 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 BFSP2Q13515 415 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 MTMR1Q13613 665 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 ZNF697Q5TEC3 545 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 CYP2W1Q8TAV3 490 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 TUT1Q9H6E5 874 aaKnown RBP28.94■■■□□ 2.22
CCNF-205ENST00000569093 EHMT1Q9H9B1 1298 aa28.94■■■□□ 2.22
CCNF-205ENST00000569093 FOSP01100 380 aaPredicted RBP28.93■■■□□ 2.22
CCNF-205ENST00000569093 CLK2P49760 499 aaKnown RBP28.93■■■□□ 2.22
CCNF-205ENST00000569093 UTP14CQ5TAP6 766 aaKnown RBP28.93■■■□□ 2.22
CCNF-205ENST00000569093 CDHR1Q96JP9 859 aa28.93■■■□□ 2.22
CCNF-205ENST00000569093 SLC26A6Q9BXS9 759 aa28.93■■■□□ 2.22
CCNF-205ENST00000569093 RBAK-RBAKDNI3L0D1 243 aa28.92■■■□□ 2.22
CCNF-205ENST00000569093 JAKMIP3Q5VZ66 844 aa28.92■■■□□ 2.22
CCNF-205ENST00000569093 TRIM50Q86XT4 487 aa28.92■■■□□ 2.22
CCNF-205ENST00000569093 GIMAP8Q8ND71 665 aaPredicted RBP28.92■■■□□ 2.22
CCNF-205ENST00000569093 MXRA8Q9BRK3 442 aa28.92■■■□□ 2.22
CCNF-205ENST00000569093 TTYH1Q9H313 450 aaPredicted RBP28.92■■■□□ 2.22
CCNF-205ENST00000569093 SEMA6BQ9H3T3 888 aa28.92■■■□□ 2.22
CCNF-205ENST00000569093 PDRG1Q9NUG6 133 aa28.92■■■□□ 2.22
CCNF-205ENST00000569093 IFNAR1P17181 557 aa28.91■■■□□ 2.22
CCNF-205ENST00000569093 TEX2Q8IWB9 1127 aa28.91■■■□□ 2.22
CCNF-205ENST00000569093 WNT8BQ93098 351 aa28.91■■■□□ 2.22
CCNF-205ENST00000569093 GUCD1Q96NT3 240 aa28.91■■■□□ 2.22
CCNF-205ENST00000569093 GLT8D2Q9H1C3 349 aa28.91■■■□□ 2.22
CCNF-205ENST00000569093 TANC1Q9C0D5 1861 aa28.91■■■□□ 2.22
CCNF-205ENST00000569093 PBX2P40425 430 aa28.9■■■□□ 2.22
CCNF-205ENST00000569093 AKAP17AQ02040 695 aaKnown RBP28.9■■■□□ 2.22
CCNF-205ENST00000569093 CAGE1Q8TC20 777 aa28.9■■■□□ 2.22
CCNF-205ENST00000569093 RNF26Q9BY78 433 aaPredicted RBP28.9■■■□□ 2.22
CCNF-205ENST00000569093 ZMYND12Q9H0C1 365 aa28.9■■■□□ 2.22
CCNF-205ENST00000569093 KCNH7Q9NS40 1196 aa28.9■■■□□ 2.22
CCNF-205ENST00000569093 TET1Q8NFU7 2136 aa28.9■■■□□ 2.22
CCNF-205ENST00000569093 COL6A3P12111 3177 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 GSTTP1A0A1W2PQM5 241 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 MAFGO15525 162 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 SMIM10L2AP0DMW4 78 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 SMIM10L2BP0DMW5 78 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 ARP10275 920 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 DNAJB2P25686 324 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 SREBF1P36956 1147 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 STK3Q13188 491 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 PTK7Q13308 1070 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 AP3B2Q13367 1082 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 CCDC155Q8N6L0 562 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 AFAP1L1Q8TED9 768 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 ZNF274Q96GC6 653 aaPredicted RBP28.89■■■□□ 2.22
CCNF-205ENST00000569093 RNPEPQ9H4A4 650 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 C6orf50Q9HD87 102 aa28.89■■■□□ 2.22
CCNF-205ENST00000569093 ESYT2A0FGR8 921 aa28.88■■■□□ 2.21
CCNF-205ENST00000569093 C17orf102A2RUQ5 167 aa28.88■■■□□ 2.21
CCNF-205ENST00000569093 CKBP12277 381 aa28.88■■■□□ 2.21
CCNF-205ENST00000569093 RFC2P35250 354 aa28.88■■■□□ 2.21
CCNF-205ENST00000569093 TCF7P36402 384 aaPredicted RBP28.88■■■□□ 2.21
CCNF-205ENST00000569093 GPNMBQ14956 572 aa28.88■■■□□ 2.21
CCNF-205ENST00000569093 TRIM71Q2Q1W2 868 aaKnown RBP28.88■■■□□ 2.21
CCNF-205ENST00000569093 FTOQ9C0B1 505 aaKnown RBP eCLIP28.88■■■□□ 2.21
CCNF-205ENST00000569093 MTIF3Q9H2K0 278 aaKnown RBP28.88■■■□□ 2.21
CCNF-205ENST00000569093 ZBBXA8MT70 800 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 PFKMP08237 780 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 SELPP16109 830 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 CEP55Q53EZ4 464 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 LRRC8DQ7L1W4 858 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 CCDC12Q8WUD4 166 aaPredicted RBP28.87■■■□□ 2.21
CCNF-205ENST00000569093 PBX4Q9BYU1 374 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 SETD4Q9NVD3 440 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 VPS54Q9P1Q0 977 aa28.87■■■□□ 2.21
CCNF-205ENST00000569093 ARHGAP4P98171 946 aa28.86■■■□□ 2.21
CCNF-205ENST00000569093 RBL2Q08999 1139 aa28.86■■■□□ 2.21
CCNF-205ENST00000569093 RASGRP4Q8TDF6 673 aa28.86■■■□□ 2.21
CCNF-205ENST00000569093 SEPT1Q8WYJ6 367 aa28.86■■■□□ 2.21
CCNF-205ENST00000569093 ATP6V0A1Q93050 837 aa28.86■■■□□ 2.21
CCNF-205ENST00000569093 STXBP5LQ9Y2K9 1186 aa28.86■■■□□ 2.21
CCNF-205ENST00000569093 SLC4A7Q9Y6M7 1214 aa28.86■■■□□ 2.21
CCNF-205ENST00000569093 MEIS1O00470 390 aa28.85■■■□□ 2.21
CCNF-205ENST00000569093 TREHO43280 583 aa28.85■■■□□ 2.21
CCNF-205ENST00000569093 HOXC8P31273 242 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms