RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 NOP56O00567 594 aaKnown RBP14.8□□□□□ -0.04
TSC2-220ENST00000568238 MEIS2O14770 477 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 SELPP16109 830 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 FGD1P98174 961 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 RBL2Q08999 1139 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 NEDD9Q14511 834 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 PCNX4Q63HM2 1172 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 APOA5Q6Q788 366 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 METTL7BQ6UX53 244 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 LRRC8DQ7L1W4 858 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 CCDC82Q8N4S0 544 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 SLC9A7Q96T83 725 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 PRDM12Q9H4Q4 367 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 PSTPIP2Q9H939 334 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 RTEL1Q9NZ71 1219 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 PCDHA11Q9Y5I1 949 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 CYP46A1Q9Y6A2 500 aa14.8□□□□□ -0.04
TSC2-220ENST00000568238 MUC3AQ02505 3323 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 BAIAP3O94812 1187 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 PARNO95453 639 aaKnown RBP14.79□□□□□ -0.04
TSC2-220ENST00000568238 LGALS2P05162 132 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 CKBP12277 381 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 SEMA3FQ13275 785 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 PTK7Q13308 1070 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 PPP2R2DQ66LE6 453 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 Q6ZUG5 572 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 RUFY3Q7L099 469 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 CYFIP1Q7L576 1253 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 HEATR3Q7Z4Q2 680 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 CNTNAP5Q8WYK1 1306 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 C16orf70Q9BSU1 422 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 TM6SF1Q9BZW5 370 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 ZSWIM6Q9HCJ5 1215 aa14.79□□□□□ -0.04
TSC2-220ENST00000568238 RBM28Q9NW13 759 aaKnown RBP14.79□□□□□ -0.04
TSC2-220ENST00000568238 TTC28Q96AY4 2481 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 MICAL3Q7RTP6 2002 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 SPDYE3A6NKU9 549 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 H3BRB1 525 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 ZBTB43O43298 467 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 MYOGP15173 224 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 UBE2SQ16763 222 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 RTN1Q16799 776 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 NLRX1Q86UT6 975 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 PHOSPHO2Q8TCD6 241 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 TUT1Q9H6E5 874 aaKnown RBP14.78□□□□□ -0.04
TSC2-220ENST00000568238 BCAS3Q9H6U6 928 aa14.78□□□□□ -0.04
TSC2-220ENST00000568238 C17orf102A2RUQ5 167 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 KCNJ6P48051 423 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 ZNF200P98182 395 aaPredicted RBP14.77□□□□□ -0.05
TSC2-220ENST00000568238 TRIM71Q2Q1W2 868 aaKnown RBP14.77□□□□□ -0.05
TSC2-220ENST00000568238 BRF1Q92994 677 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 WNT8BQ93098 351 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 CDHR1Q96JP9 859 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 GPR20Q99678 358 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 SENP7Q9BQF6 1050 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 PDRG1Q9NUG6 133 aa14.77□□□□□ -0.05
TSC2-220ENST00000568238 ZNF215Q9UL58 517 aaPredicted RBP14.77□□□□□ -0.05
TSC2-220ENST00000568238 NAP1L2Q9ULW6 460 aaPredicted RBP14.77□□□□□ -0.05
TSC2-220ENST00000568238 KLF18A0A0U1RQI7 1052 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 GOLGA8AA7E2F4 631 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 GOLGA8BA8MQT2 603 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 NBNO60934 754 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 CXCL10P02778 98 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 CA3P07451 260 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 SMIM10L2AP0DMW4 78 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 SMIM10L2BP0DMW5 78 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 HOXC8P31273 242 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 RBM25P49756 843 aaKnown RBP14.76□□□□□ -0.05
TSC2-220ENST00000568238 SP4Q02446 784 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 HIC1Q14526 733 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 GPNMBQ14956 572 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 WWC2Q6AWC2 1192 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 PPP1R18Q6NYC8 613 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 CNKSR3Q6P9H4 555 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 SERINC5Q86VE9 423 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 TRIM50Q86XT4 487 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 HERC6Q8IVU3 1022 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 USP38Q8NB14 1042 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 GIMAP8Q8ND71 665 aaPredicted RBP14.76□□□□□ -0.05
TSC2-220ENST00000568238 ATP6V0A1Q93050 837 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 GPRASP2Q96D09 838 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 IL17RAQ96F46 866 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 EHMT1Q9H9B1 1298 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
TSC2-220ENST00000568238 COL4A4P53420 1690 aaPredicted RBP14.76□□□□□ -0.05
TSC2-220ENST00000568238 EMSYQ7Z589 1322 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 THPOP40225 353 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 RCAN1P53805 252 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 NAPAP54920 295 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 WDR5P61964 334 aaKnown RBP14.75□□□□□ -0.05
TSC2-220ENST00000568238 APOBRQ0VD83 1088 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 MTMR1Q13613 665 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 ZNF618Q5T7W0 954 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 TRAF7Q6Q0C0 670 aa14.75□□□□□ -0.05
TSC2-220ENST00000568238 KIF28PB7ZC32 967 aa14.74□□□□□ -0.05
TSC2-220ENST00000568238 hCG_1984214I3L0E3 225 aa14.74□□□□□ -0.05
TSC2-220ENST00000568238 EFCAB14O75071 495 aa14.74□□□□□ -0.05
TSC2-220ENST00000568238 GNAT1P11488 350 aa14.74□□□□□ -0.05
TSC2-220ENST00000568238 KCNA2P16389 499 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms