RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 HIC1Q14526 733 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 PTGISQ16647 500 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 GNPTABQ3T906 1256 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 WWC2Q6AWC2 1192 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 PSRC1Q6PGN9 363 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 OTOP2Q7RTS6 562 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 VSIG10LQ86VR7 867 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 SGMS1Q86VZ5 419 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 C7orf31Q8N865 590 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 SLC43A3Q8NBI5 491 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 PGBD1Q96JS3 809 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 MAF1Q9H063 256 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 WNT8AQ9H1J5 351 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 PPP4R2Q9NY27 417 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 MAP3K20Q9NYL2 800 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 PTPRSQ13332 1948 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 LOXHD1Q8IVV2 1947 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 MYH9P35579 1960 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 GRXCR1A8MXD5 290 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 RBAK-RBAKDNI3L0D1 243 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 ADCY7P51828 1080 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 SP2Q02086 613 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 GHRHRQ02643 423 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 KIAA0753Q2KHM9 967 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 TMEM240Q5SV17 173 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 CELF3Q5SZQ8 465 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 UTP14CQ5TAP6 766 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 FAM109BQ6ICB4 259 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 SAMD3Q8N6K7 520 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 RETREG2Q8NC44 543 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 PPTC7Q8NI37 304 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 MTIF3Q9H2K0 278 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 IL23AQ9NPF7 189 aa11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 V9GY48 417 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-206ENST00000566779 WDR81Q562E7 1941 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 MEIS2O14770 477 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 SMARCA1P28370 1054 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 MRPS9P82933 396 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 HSDL1Q3SXM5 330 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 GDF6Q6KF10 455 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 NFRKBQ6P4R8 1299 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 KCNV1Q6PIU1 500 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 NLRX1Q86UT6 975 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 TRIM50Q86XT4 487 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 CCDC155Q8N6L0 562 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 KAT2BQ92831 832 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 KATNAL1Q9BW62 490 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 SEZ6LQ9BYH1 1024 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 BCAS3Q9H6U6 928 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 EHMT1Q9H9B1 1298 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 MTMR10Q9NXD2 777 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 HDAC6Q9UBN7 1215 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 FRMPD4Q14CM0 1322 aa11.6□□□□□ -0.55
GTF3C1-206ENST00000566779 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 FIBPO43427 364 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 FGBP02675 491 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 C7P10643 843 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 FECHP22830 423 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 RPS6KB1P23443 525 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 DNAJB2P25686 324 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 PSMA5P28066 241 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 CDC27P30260 824 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 PBX2P40425 430 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 CCT2P78371 535 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 ZNF200P98182 395 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 BFSP2Q13515 415 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 TSGA10IPQ3SY00 556 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 MYSM1Q5VVJ2 828 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 PCNX4Q63HM2 1172 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 UPF3BQ9BZI7 483 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 TMEM260Q9NX78 707 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 CXXC1Q9P0U4 656 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 PCDHA6Q9UN73 950 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 PCDHA8Q9Y5H6 950 aa11.59□□□□□ -0.55
GTF3C1-206ENST00000566779 SIP14410 1827 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 SZT2Q5T011 3432 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 PIK3CDO00329 1044 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 F2P00734 622 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 LGALS2P05162 132 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 ADD1P35611 737 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 SMAD3P84022 425 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 AKAP17AQ02040 695 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 PTPN11Q06124 597 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 STK3Q13188 491 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 SEMA3FQ13275 785 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 NEDD9Q14511 834 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 AMHR2Q16671 573 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 JAKMIP3Q5VZ66 844 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 GPR153Q6NV75 609 aa11.58□□□□□ -0.56
GTF3C1-206ENST00000566779 RPUSD2Q8IZ73 545 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms