RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 TGFB3P10600 412 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 SMARCA1P28370 1054 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 GNAQP50148 359 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 WDR5P61964 334 aaKnown RBP12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 DEFB103AP81534 67 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 SP4Q02446 784 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 FUT2Q10981 343 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 TRAF1Q13077 416 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 PTK7Q13308 1070 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 PCNX4Q63HM2 1172 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 WWC2Q6AWC2 1192 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 KCNV1Q6PIU1 500 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 GPR20Q99678 358 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 LZTS2Q9BRK4 669 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 KATNAL1Q9BW62 490 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 LCHNA4D1U4 455 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 FIBPO43427 364 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 CDC45O75419 566 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 CXCL10P02778 98 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 ITGB5P18084 799 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 IGFBP4P22692 258 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 HOXC8P31273 242 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 CCDC85BQ15834 202 aaPredicted RBP12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 GNPTABQ3T906 1256 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 KRT40Q6A162 431 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 HEATR3Q7Z4Q2 680 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 SERINC5Q86VE9 423 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 HERC6Q8IVU3 1022 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 TMTC2Q8N394 836 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 CCDC155Q8N6L0 562 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 GAS2L1Q99501 681 aaPredicted RBP12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 PSTPIP2Q9H939 334 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
KLHDC4-209ENST00000562872 H3BRB1 525 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 TREHO43280 583 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 CALM1P0DP23 149 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 CALM2P0DP24 149 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 CALM3P0DP25 149 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 ACTN1P12814 892 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 KCNA2P16389 499 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 CDC27P30260 824 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 TAP1Q03518 808 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 UTP14CQ5TAP6 766 aaKnown RBP12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 CUL5Q93034 780 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 SLC9A7Q96T83 725 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 TUT1Q9H6E5 874 aaKnown RBP12.71□□□□□ -0.37
KLHDC4-209ENST00000562872 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 NOP56O00567 594 aaKnown RBP12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 STAM2O75886 525 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 THPOP40225 353 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 MKRN4PQ13434 485 aaPredicted RBP12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 NEDD9Q14511 834 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 RNF20Q5VTR2 975 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 CNKSR3Q6P9H4 555 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 DHX32Q7L7V1 743 aaKnown RBP12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 CYP2W1Q8TAV3 490 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 ATP6V0A1Q93050 837 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 SETD4Q9NVD3 440 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 PCDHA6Q9UN73 950 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 PCDHA8Q9Y5H6 950 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 UBIAD1Q9Y5Z9 338 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 TRANK1O15050 2925 aa12.7□□□□□ -0.38
KLHDC4-209ENST00000562872 MYO9BQ13459 2157 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 KLF18A0A0U1RQI7 1052 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 C17orf102A2RUQ5 167 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 GOLGA8AA7E2F4 631 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 STXBP3O00186 592 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 ZBTB43O43298 467 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 BAIAP3O94812 1187 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 CTSHP09668 335 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 RTN1Q16799 776 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 MICALL1Q8N3F8 863 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 PHOSPHO2Q8TCD6 241 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 LMBR1Q8WVP7 490 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 ARNTL2Q8WYA1 636 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 KCNB2Q92953 911 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 GPRASP2Q96D09 838 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 TMEM260Q9NX78 707 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 MUC3AQ02505 3323 aa12.69□□□□□ -0.38
KLHDC4-209ENST00000562872 GSTTP1A0A1W2PQM5 241 aa12.68□□□□□ -0.38
KLHDC4-209ENST00000562872 TLL1O43897 1013 aa12.68□□□□□ -0.38
KLHDC4-209ENST00000562872 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
KLHDC4-209ENST00000562872 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms