RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 NID2Q14112 1375 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 ZBBXA8MT70 800 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 H3BRB1 525 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 MAFGO15525 162 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 IQCF3P0C7M6 154 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 SEMA3FQ13275 785 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 RASIP1Q5U651 963 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 DEFB128Q7Z7B8 93 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 TM6SF1Q9BZW5 370 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 FTOQ9C0B1 505 aaKnown RBP eCLIP20.39■□□□□ 0.85
CMTM3-204ENST00000562357 TUT1Q9H6E5 874 aaKnown RBP20.39■□□□□ 0.85
CMTM3-204ENST00000562357 ZSWIM6Q9HCJ5 1215 aa20.39■□□□□ 0.85
CMTM3-204ENST00000562357 PARNO95453 639 aaKnown RBP20.38■□□□□ 0.85
CMTM3-204ENST00000562357 ITGB5P18084 799 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 DNAJB2P25686 324 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 PTK7Q13308 1070 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 RAB30Q15771 203 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 MCTP2Q6DN12 878 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 TYW1BQ6NUM6 668 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 GPR20Q99678 358 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 C16orf70Q9BSU1 422 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 ANO3Q9BYT9 981 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 C6orf50Q9HD87 102 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 JADE2Q9NQC1 790 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 UBIAD1Q9Y5Z9 338 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 SLC4A7Q9Y6M7 1214 aa20.38■□□□□ 0.85
CMTM3-204ENST00000562357 C17orf102A2RUQ5 167 aa20.37■□□□□ 0.85
CMTM3-204ENST00000562357 GNAT1P11488 350 aa20.37■□□□□ 0.85
CMTM3-204ENST00000562357 SELPP16109 830 aa20.37■□□□□ 0.85
CMTM3-204ENST00000562357 UTP14CQ5TAP6 766 aaKnown RBP20.37■□□□□ 0.85
CMTM3-204ENST00000562357 CPLX2Q6PUV4 134 aaKnown RBP20.37■□□□□ 0.85
CMTM3-204ENST00000562357 LRRC8DQ7L1W4 858 aa20.37■□□□□ 0.85
CMTM3-204ENST00000562357 TRIM22Q8IYM9 498 aa20.37■□□□□ 0.85
CMTM3-204ENST00000562357 TIFAQ96CG3 184 aa20.37■□□□□ 0.85
CMTM3-204ENST00000562357 RNF26Q9BY78 433 aaPredicted RBP20.37■□□□□ 0.85
CMTM3-204ENST00000562357 MSRAQ9UJ68 235 aa20.37■□□□□ 0.85
CMTM3-204ENST00000562357 CPLX1O14810 134 aa20.36■□□□□ 0.85
CMTM3-204ENST00000562357 PRPF3O43395 683 aaKnown RBP20.36■□□□□ 0.85
CMTM3-204ENST00000562357 GNA11P29992 359 aa20.36■□□□□ 0.85
CMTM3-204ENST00000562357 PDIA3P30101 505 aaKnown RBP20.36■□□□□ 0.85
CMTM3-204ENST00000562357 ZNF76P36508 570 aa20.36■□□□□ 0.85
CMTM3-204ENST00000562357 CCT2P78371 535 aaKnown RBP20.36■□□□□ 0.85
CMTM3-204ENST00000562357 CCDC148Q8NFR7 591 aa20.36■□□□□ 0.85
CMTM3-204ENST00000562357 SLC26A6Q9BXS9 759 aa20.36■□□□□ 0.85
CMTM3-204ENST00000562357 SEMA6BQ9H3T3 888 aa20.36■□□□□ 0.85
CMTM3-204ENST00000562357 PKD2L1Q9P0L9 805 aa20.36■□□□□ 0.85
CMTM3-204ENST00000562357 MYH7BA7E2Y1 1941 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 ESYT2A0FGR8 921 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 KCNA2P16389 499 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 TCF7P36402 384 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-204ENST00000562357 EVCP57679 992 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 RBL2Q08999 1139 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 REXO1Q8N1G1 1221 aaKnown RBP20.35■□□□□ 0.85
CMTM3-204ENST00000562357 BICD2Q8TD16 824 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 SEPT1Q8WYJ6 367 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 ATP6V0A1Q93050 837 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 PHKBQ93100 1093 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 PGBD1Q96JS3 809 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 MXRA8Q9BRK3 442 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 SDF4Q9BRK5 362 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
CMTM3-204ENST00000562357 BCAS3Q9H6U6 928 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 PDRG1Q9NUG6 133 aa20.35■□□□□ 0.85
CMTM3-204ENST00000562357 CXXC1Q9P0U4 656 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-204ENST00000562357 SMIM10L2AP0DMW4 78 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 SMIM10L2BP0DMW5 78 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 CKBP12277 381 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 IFNAR1P17181 557 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 SREBF1P36956 1147 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 CEP55Q53EZ4 464 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 JAKMIP3Q5VZ66 844 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 TRIM50Q86XT4 487 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 GUCD1Q96NT3 240 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 CTAGE1Q96RT6 745 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 PBX4Q9BYU1 374 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 JPH1Q9HDC5 661 aaPredicted RBP20.34■□□□□ 0.85
CMTM3-204ENST00000562357 KCNH7Q9NS40 1196 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 TMEM260Q9NX78 707 aa20.34■□□□□ 0.85
CMTM3-204ENST00000562357 GRXCR1A8MXD5 290 aa20.33■□□□□ 0.85
CMTM3-204ENST00000562357 ATP9AO75110 1047 aa20.33■□□□□ 0.85
CMTM3-204ENST00000562357 ATP2A2P16615 1042 aaKnown RBP20.33■□□□□ 0.85
CMTM3-204ENST00000562357 TOB2Q14106 344 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-204ENST00000562357 DHX38Q92620 1227 aaKnown RBP20.33■□□□□ 0.85
CMTM3-204ENST00000562357 GLG1Q92896 1179 aa20.33■□□□□ 0.85
CMTM3-204ENST00000562357 ZNF274Q96GC6 653 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-204ENST00000562357 ZMYND12Q9H0C1 365 aa20.33■□□□□ 0.85
CMTM3-204ENST00000562357 TTYH1Q9H313 450 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-204ENST00000562357 NCOA5Q9HCD5 579 aaKnown RBP20.33■□□□□ 0.85
CMTM3-204ENST00000562357 BAIAP3O94812 1187 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 THPOP40225 353 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 KCNJ6P48051 423 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 CLK2P49760 499 aaKnown RBP20.32■□□□□ 0.84
CMTM3-204ENST00000562357 ARHGAP4P98171 946 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 ZNF200P98182 395 aaPredicted RBP20.32■□□□□ 0.84
CMTM3-204ENST00000562357 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
CMTM3-204ENST00000562357 SERINC5Q86VE9 423 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 SLC9A7Q96T83 725 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 CDX2Q99626 313 aaPredicted RBP20.32■□□□□ 0.84
CMTM3-204ENST00000562357 ZNF576Q9H609 170 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 AZI2Q9H6S1 392 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms