RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SERINC5Q86VE9 423 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 FLCNQ8NFG4 579 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 POF1BQ8WVV4 589 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 SUSD6Q92537 303 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
HERC1-210ENST00000560897 ATP6V0A1Q93050 837 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 RANBP17Q9H2T7 1088 aaKnown RBP11.26□□□□□ -0.61
HERC1-210ENST00000560897 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 MYO10Q9HD67 2058 aa11.26□□□□□ -0.61
HERC1-210ENST00000560897 DMXL1Q9Y485 3027 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 CEP250Q9BV73 2442 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 BRD1O95696 1058 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 LAMC2Q13753 1193 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 CDCA3Q99618 268 aaPredicted RBP11.25□□□□□ -0.61
HERC1-210ENST00000560897 DLL3Q9NYJ7 618 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 MYH7BA7E2Y1 1941 aa11.25□□□□□ -0.61
HERC1-210ENST00000560897 CHD8Q9HCK8 2581 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 ZNF292O60281 2723 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 MAP1BP46821 2468 aaKnown RBP11.24□□□□□ -0.61
HERC1-210ENST00000560897 RBAK-RBAKDNI3L0D1 243 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 HAS3O00219 553 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 APPP05067 770 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 ITGB1P05556 798 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 LINC00271P0C7V0 271 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 SDHBP21912 280 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 TFAP4Q01664 338 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 CAMK1Q14012 370 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 ZC3H14Q6PJT7 736 aaKnown RBP11.24□□□□□ -0.61
HERC1-210ENST00000560897 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 CYP2W1Q8TAV3 490 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 SPPL3Q8TCT6 385 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 CHAMP1Q96JM3 812 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
HERC1-210ENST00000560897 BOLA2Q9H3K6 86 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 MRVI1Q9Y6F6 885 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 KIAA1217Q5T5P2 1943 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 SPTBN2O15020 2390 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 ATRXP46100 2492 aa11.24□□□□□ -0.61
HERC1-210ENST00000560897 PER2O15055 1255 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 DNAJB1P25685 340 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 STXBP2Q15833 593 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 RSPO4Q2I0M5 234 aaPredicted RBP11.23□□□□□ -0.61
HERC1-210ENST00000560897 KIAA0319Q5VV43 1072 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 TMEM57Q8N5G2 664 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 KLHL23Q8NBE8 558 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 DCAF4Q8WV16 495 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 EMID1Q96A84 441 aaPredicted RBP11.23□□□□□ -0.61
HERC1-210ENST00000560897 RTP3Q9BQQ7 232 aa11.23□□□□□ -0.61
HERC1-210ENST00000560897 TSPY2A6NKD2 308 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 GSG1L2A8MUP6 293 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 GNAT1P11488 350 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 RFX1P22670 979 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 SLC16A2P36021 539 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 TECP42680 631 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 COL9A2Q14055 689 aaPredicted RBP11.22□□□□□ -0.61
HERC1-210ENST00000560897 PKD1L2Q7Z442 2459 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 CMTR2Q8IYT2 770 aaKnown RBP11.22□□□□□ -0.61
HERC1-210ENST00000560897 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
HERC1-210ENST00000560897 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 RUBCNQ92622 972 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 STRBPQ96SI9 672 aaKnown RBP11.22□□□□□ -0.61
HERC1-210ENST00000560897 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 KIAA1671Q9BY89 1806 aa11.22□□□□□ -0.61
HERC1-210ENST00000560897 RC3H2Q9HBD1 1191 aaKnown RBP11.22□□□□□ -0.61
HERC1-210ENST00000560897 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
HERC1-210ENST00000560897 MRPL42Q9Y6G3 142 aaKnown RBP11.22□□□□□ -0.61
HERC1-210ENST00000560897 TREHO43280 583 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 PPFIA4O75335 1185 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 CHGBP05060 677 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 GNAT2P19087 354 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 AOC1P19801 751 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 SPOUT1Q5T280 376 aaKnown RBP11.21□□□□□ -0.61
HERC1-210ENST00000560897 CES5AQ6NT32 575 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 ANKRD54Q6NXT1 300 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 DTWD2Q8NBA8 298 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 ATP8B4Q8TF62 1192 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 ZNF689Q96CS4 500 aaPredicted RBP11.21□□□□□ -0.61
HERC1-210ENST00000560897 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 SPATA33Q96N06 139 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 NECTIN4Q96NY8 510 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 NACAP1Q9BZK3 213 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 TNNQ9UQP3 1299 aa11.21□□□□□ -0.61
HERC1-210ENST00000560897 TTC3P53804 2025 aa11.21□□□□□ -0.62
HERC1-210ENST00000560897 CFAP47Q6ZTR5 3102 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 C2CD4DB7Z1M9 353 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 DGKIO75912 1065 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 SMIM10L2AP0DMW4 78 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 SMIM10L2BP0DMW5 78 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 GHRP10912 638 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 HOXB8P17481 243 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms