RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 LRG1P02750 347 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 GNAT1P11488 350 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 ADAM9Q13443 819 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 NTRK3Q16288 839 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 SKOR2Q2VWA4 1001 aaPredicted RBP5.78□□□□□ -1.48
SPG11-218ENST00000559754 RGL3Q3MIN7 710 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 PRR31Q5SQ13 230 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 PRAMEF18Q5VWM3 479 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 SCUBE1Q8IWY4 988 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 CDC6Q99741 560 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 SYT3Q9BQG1 590 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 BDH2Q9BUT1 245 aa5.78□□□□□ -1.48
SPG11-218ENST00000559754 MROH6A6NGR9 719 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 C9orf118A6NHY6 69 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 DDX3XO00571 662 aaKnown RBP eCLIP5.77□□□□□ -1.49
SPG11-218ENST00000559754 AQP7O14520 342 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 NAT1P18440 290 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 CNR2P34972 360 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 SSRP1Q08945 709 aaKnown RBP5.77□□□□□ -1.49
SPG11-218ENST00000559754 SPATS1Q496A3 300 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 KCNT2Q6UVM3 1135 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 SPATC1Q76KD6 591 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 MAMDC2Q7Z304 686 aaPredicted RBP5.77□□□□□ -1.49
SPG11-218ENST00000559754 FERMT3Q86UX7 667 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 LGI4Q8N135 537 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 UHMK1Q8TAS1 419 aaKnown RBP5.77□□□□□ -1.49
SPG11-218ENST00000559754 DDX1Q92499 740 aaKnown RBP5.77□□□□□ -1.49
SPG11-218ENST00000559754 LCORQ96JN0 433 aaPredicted RBP5.77□□□□□ -1.49
SPG11-218ENST00000559754 L2HGDHQ9H9P8 463 aa5.77□□□□□ -1.49
SPG11-218ENST00000559754 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
SPG11-218ENST00000559754 SLC27A2O14975 620 aa5.76□□□□□ -1.49
SPG11-218ENST00000559754 SOD2P04179 222 aa5.76□□□□□ -1.49
SPG11-218ENST00000559754 ZNF28P17035 718 aa5.76□□□□□ -1.49
SPG11-218ENST00000559754 GTF2F1P35269 517 aaKnown RBP eCLIP5.76□□□□□ -1.49
SPG11-218ENST00000559754 SUMO1P63165 101 aaKnown RBP5.76□□□□□ -1.49
SPG11-218ENST00000559754 YOD1Q5VVQ6 348 aaPredicted RBP5.76□□□□□ -1.49
SPG11-218ENST00000559754 MCTP2Q6DN12 878 aa5.76□□□□□ -1.49
SPG11-218ENST00000559754 LRP10Q7Z4F1 713 aa5.76□□□□□ -1.49
SPG11-218ENST00000559754 PRRT2Q7Z6L0 340 aaPredicted RBP5.76□□□□□ -1.49
SPG11-218ENST00000559754 ZBTB38Q8NAP3 1195 aaPredicted RBP5.76□□□□□ -1.49
SPG11-218ENST00000559754 TXNDC5Q8NBS9 432 aaKnown RBP5.76□□□□□ -1.49
SPG11-218ENST00000559754 KCNJ15Q99712 375 aa5.76□□□□□ -1.49
SPG11-218ENST00000559754 PDGFDQ9GZP0 370 aaPredicted RBP5.76□□□□□ -1.49
SPG11-218ENST00000559754 TRBV23-1A0A0A0MS06 115 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 BLACEA4D250 179 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 CCDC85CA6NKD9 419 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 K7ESM1 405 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 CYP1A1P04798 512 aaPredicted RBP5.75□□□□□ -1.49
SPG11-218ENST00000559754 IL13P35225 146 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 TUSC3Q13454 348 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 SURF1Q15526 300 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 LONRF2Q1L5Z9 754 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 ZC3H12BQ5HYM0 836 aaKnown RBP5.75□□□□□ -1.49
SPG11-218ENST00000559754 VASNQ6EMK4 673 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 PLEKHH3Q7Z736 793 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 PTPRN2Q92932 1015 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 BORCS6Q96GS4 357 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 ZSWIM3Q96MP5 696 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 TMEM168Q9H0V1 697 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 PFDN2Q9UHV9 154 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 DSEQ9UL01 958 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 DUSP10Q9Y6W6 482 aa5.75□□□□□ -1.49
SPG11-218ENST00000559754 ADCY3O60266 1144 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 APPP05067 770 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 ADRB1P08588 477 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 FAHP16930 419 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 EFEMP1Q12805 493 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 PAK1Q13153 545 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 HABP4Q5JVS0 413 aaKnown RBP5.74□□□□□ -1.49
SPG11-218ENST00000559754 SOGA3Q5TF21 947 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 MTDHQ86UE4 582 aaKnown RBP5.74□□□□□ -1.49
SPG11-218ENST00000559754 CLEC4DQ8WXI8 215 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 DLL4Q9NR61 685 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 FTSJ1Q9UET6 329 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 CROTQ9UKG9 612 aa5.74□□□□□ -1.49
SPG11-218ENST00000559754 PLATP00750 562 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 COL6A2P12110 1019 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 EPHA5P54756 1037 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 GRIN1Q05586 938 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 RBL2Q08999 1139 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 SF3A1Q15459 793 aaKnown RBP5.73□□□□□ -1.49
SPG11-218ENST00000559754 ZNF827Q17R98 1081 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 PAN2Q504Q3 1202 aaKnown RBP5.73□□□□□ -1.49
SPG11-218ENST00000559754 TMC5Q6UXY8 1006 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 DBX2Q6ZNG2 339 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.73□□□□□ -1.49
SPG11-218ENST00000559754 YTHDC1Q96MU7 727 aaKnown RBP5.73□□□□□ -1.49
SPG11-218ENST00000559754 IPPKQ9H8X2 491 aa5.73□□□□□ -1.49
SPG11-218ENST00000559754 GSTA4O15217 222 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 NKRFO15226 690 aaKnown RBP eCLIP5.72□□□□□ -1.49
SPG11-218ENST00000559754 CHGBP05060 677 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 ITGB3P05106 788 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 MLLT6P55198 1093 aaPredicted RBP5.72□□□□□ -1.49
SPG11-218ENST00000559754 GABREP78334 506 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 TRMT10BQ6PF06 316 aaKnown RBP5.72□□□□□ -1.49
SPG11-218ENST00000559754 KCTD1Q719H9 257 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 NLGN4XQ8N0W4 816 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 DTX3Q8N9I9 347 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 DEPDC7Q96QD5 511 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 DHRS4Q9BTZ2 278 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms