RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 SP4Q02446 784 aa22.21■■□□□ 1.15
SHF-205ENST00000559566 ITGA7Q13683 1181 aa22.21■■□□□ 1.15
SHF-205ENST00000559566 NEDD9Q14511 834 aa22.21■■□□□ 1.15
SHF-205ENST00000559566 SH3RF1Q7Z6J0 888 aa22.21■■□□□ 1.15
SHF-205ENST00000559566 PLA2G4DQ86XP0 818 aa22.21■■□□□ 1.15
SHF-205ENST00000559566 IL27Q8NEV9 243 aa22.21■■□□□ 1.15
SHF-205ENST00000559566 GPR20Q99678 358 aa22.21■■□□□ 1.15
SHF-205ENST00000559566 PQBP1O60828 265 aaKnown RBP22.2■■□□□ 1.14
SHF-205ENST00000559566 CABYRO75952 493 aa22.2■■□□□ 1.14
SHF-205ENST00000559566 TDP2O95551 362 aa22.2■■□□□ 1.14
SHF-205ENST00000559566 MCM2P49736 904 aa22.2■■□□□ 1.14
SHF-205ENST00000559566 INF2Q27J81 1249 aa22.2■■□□□ 1.14
SHF-205ENST00000559566 NIPA1Q7RTP0 329 aa22.2■■□□□ 1.14
SHF-205ENST00000559566 CDHR1Q96JP9 859 aa22.2■■□□□ 1.14
SHF-205ENST00000559566 BTBD18B2RXH4 712 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 KRT2P35908 639 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 HMGN5P82970 282 aaKnown RBP22.19■■□□□ 1.14
SHF-205ENST00000559566 NONOQ15233 471 aaKnown RBP eCLIP22.19■■□□□ 1.14
SHF-205ENST00000559566 DGKDQ16760 1214 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 PRR16Q569H4 304 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 BRDTQ58F21 947 aaPredicted RBP22.19■■□□□ 1.14
SHF-205ENST00000559566 PIK3AP1Q6ZUJ8 805 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 ANKRD33Q7Z3H0 272 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 KRT25Q7Z3Z0 450 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 DIS3L2Q8IYB7 885 aaKnown RBP22.19■■□□□ 1.14
SHF-205ENST00000559566 PDLIM7Q9NR12 457 aa22.19■■□□□ 1.14
SHF-205ENST00000559566 MYH7BA7E2Y1 1941 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 DOCK5Q9H7D0 1870 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 MAFGO15525 162 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 KPNA6O60684 536 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 F2P00734 622 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 FAAP100Q0VG06 881 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 NBPF20Q3BBV1 942 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 TRIM50Q86XT4 487 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 FAM126BQ8IXS8 530 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 GJA10Q969M2 543 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 C8orf76Q96K31 380 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 C16orf70Q9BSU1 422 aa22.18■■□□□ 1.14
SHF-205ENST00000559566 GSTTP1A0A1W2PQM5 241 aa22.17■■□□□ 1.14
SHF-205ENST00000559566 TRIM43BA6NCK2 446 aa22.17■■□□□ 1.14
SHF-205ENST00000559566 WNT7AO00755 349 aa22.17■■□□□ 1.14
SHF-205ENST00000559566 DHX15O43143 795 aaKnown RBP22.17■■□□□ 1.14
SHF-205ENST00000559566 LGALS2P05162 132 aa22.17■■□□□ 1.14
SHF-205ENST00000559566 USP11P51784 963 aa22.17■■□□□ 1.14
SHF-205ENST00000559566 TRIM43Q96BQ3 446 aaPredicted RBP22.17■■□□□ 1.14
SHF-205ENST00000559566 MBOAT7Q96N66 472 aa22.17■■□□□ 1.14
SHF-205ENST00000559566 NR2E3Q9Y5X4 410 aa22.17■■□□□ 1.14
SHF-205ENST00000559566 NFASCO94856 1347 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 CCDC194A0A1B0GVG4 234 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 DDX39AO00148 427 aaKnown RBP22.16■■□□□ 1.14
SHF-205ENST00000559566 HAS3O00219 553 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 PPFIA4O75335 1185 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 CCNE2O96020 404 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 CD4P01730 458 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 ITGB8P26012 769 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 PSEN2P49810 448 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 CHMP4BP1P59074 171 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 CUL4AQ13619 759 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 FAM184AQ8NB25 1140 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 FBXO18Q8NFZ0 1043 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 TRPV6Q9H1D0 765 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 SCN10AQ9Y5Y9 1956 aa22.16■■□□□ 1.14
SHF-205ENST00000559566 CYP3A7-CYP3A51PA0A087WV96 503 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 NOP56O00567 594 aaKnown RBP22.15■■□□□ 1.14
SHF-205ENST00000559566 MSH4O15457 936 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 SLC37A4O43826 429 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 B4GALT4O60513 344 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 CYP3A7P24462 503 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 GJB2P29033 226 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 TRIM29Q14134 588 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 HIC1Q14526 733 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 LETM2Q2VYF4 491 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 UTP14CQ5TAP6 766 aaKnown RBP22.15■■□□□ 1.14
SHF-205ENST00000559566 PRPF38BQ5VTL8 546 aaKnown RBP22.15■■□□□ 1.14
SHF-205ENST00000559566 GIMAP8Q8ND71 665 aaPredicted RBP22.15■■□□□ 1.14
SHF-205ENST00000559566 TOX2Q96NM4 488 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 PCYT2Q99447 389 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 JPH1Q9HDC5 661 aaPredicted RBP22.15■■□□□ 1.14
SHF-205ENST00000559566 PRDM5Q9NQX1 630 aaPredicted RBP22.15■■□□□ 1.14
SHF-205ENST00000559566 SLC9A2Q9UBY0 812 aa22.15■■□□□ 1.14
SHF-205ENST00000559566 KIF28PB7ZC32 967 aa22.14■■□□□ 1.13
SHF-205ENST00000559566 IPO5O00410 1097 aaKnown RBP22.14■■□□□ 1.13
SHF-205ENST00000559566 CLTBP09497 229 aa22.14■■□□□ 1.13
SHF-205ENST00000559566 TCF7P36402 384 aaPredicted RBP22.14■■□□□ 1.13
SHF-205ENST00000559566 SETQ01105 290 aaPredicted RBP22.14■■□□□ 1.13
SHF-205ENST00000559566 MFSD10Q14728 455 aa22.14■■□□□ 1.13
SHF-205ENST00000559566 NEK8Q86SG6 692 aa22.14■■□□□ 1.13
SHF-205ENST00000559566 ZNF577Q9BSK1 485 aa22.14■■□□□ 1.13
SHF-205ENST00000559566 TRMT13Q9NUP7 481 aaKnown RBP22.14■■□□□ 1.13
SHF-205ENST00000559566 TBX21Q9UL17 535 aa22.14■■□□□ 1.13
SHF-205ENST00000559566 RBAK-RBAKDNI3L0D1 243 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 ACTR2P61160 394 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 KIAA0753Q2KHM9 967 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 Q4G0T1 1027 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 FAM47CQ5HY64 1035 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 SEPT1Q8WYJ6 367 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 CTAGE1Q96RT6 745 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 SDF4Q9BRK5 362 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 BRMS1Q9HCU9 246 aa22.13■■□□□ 1.13
SHF-205ENST00000559566 PDE4DIPQ5VU43 2346 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms