RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 GHRHRQ02643 423 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
CPNE6-208ENST00000558795 GPM6BQ13491 265 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 PGM5Q15124 567 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
CPNE6-208ENST00000558795 CSPP1Q1MSJ5 1256 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 IFIT1BQ5T764 474 aaKnown RBP17.78■□□□□ 0.44
CPNE6-208ENST00000558795 CWC27Q6UX04 472 aaKnown RBP17.78■□□□□ 0.44
CPNE6-208ENST00000558795 EP400NLQ6ZTU2 488 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 VSIG10LQ86VR7 867 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 SAMD3Q8N6K7 520 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 C16orf70Q9BSU1 422 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 CNNM2Q9H8M5 875 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 FAM50BQ9Y247 325 aa17.78■□□□□ 0.44
CPNE6-208ENST00000558795 KLRF2D3W0D1 207 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 H3BQ06 376 aaPredicted RBP17.77■□□□□ 0.44
CPNE6-208ENST00000558795 H3BRB1 525 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 ZBTB5O15062 677 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 UPP2O95045 317 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 SMIM10L2AP0DMW4 78 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 SMIM10L2BP0DMW5 78 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 SP2Q02086 613 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 STAG2Q8N3U4 1231 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 BANK1Q8NDB2 785 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 IL31RAQ8NI17 732 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 NEK9Q8TD19 979 aa17.77■□□□□ 0.44
CPNE6-208ENST00000558795 TUT1Q9H6E5 874 aaKnown RBP17.77■□□□□ 0.44
CPNE6-208ENST00000558795 NLRC5Q86WI3 1866 aa17.77■□□□□ 0.43
CPNE6-208ENST00000558795 MUC6Q6W4X9 2439 aa17.77■□□□□ 0.43
CPNE6-208ENST00000558795 H3BNC9 293 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 NOP56O00567 594 aaKnown RBP17.76■□□□□ 0.43
CPNE6-208ENST00000558795 TREHO43280 583 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 CAND2O75155 1236 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 CTSHP09668 335 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 TRAF1Q13077 416 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 TMEM192Q8IY95 271 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 TOP1MTQ969P6 601 aa17.76■□□□□ 0.43
CPNE6-208ENST00000558795 ZFP91Q96JP5 570 aaPredicted RBP17.76■□□□□ 0.43
CPNE6-208ENST00000558795 GCOM1H8Y6P7 765 aaPredicted RBP17.75■□□□□ 0.43
CPNE6-208ENST00000558795 HIP1O00291 1037 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 PPP1R11O60927 126 aaPredicted RBP17.75■□□□□ 0.43
CPNE6-208ENST00000558795 LGALS2P05162 132 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 POLR2MP0CAP2 368 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 GNAT1P11488 350 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 TCEAL5Q5H9L2 206 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 PABPC5Q96DU9 382 aaKnown RBP17.75■□□□□ 0.43
CPNE6-208ENST00000558795 DSCC1Q9BVC3 393 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 IFIH1Q9BYX4 1025 aaKnown RBP17.75■□□□□ 0.43
CPNE6-208ENST00000558795 RNPEPQ9H4A4 650 aa17.75■□□□□ 0.43
CPNE6-208ENST00000558795 NSUN3Q9H649 340 aaKnown RBP17.75■□□□□ 0.43
CPNE6-208ENST00000558795 RALGAPA2Q2PPJ7 1873 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 DCXO43602 365 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 HOXC8P31273 242 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 GNPTABQ3T906 1256 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 ALYREFQ86V81 257 aaKnown RBP17.74■□□□□ 0.43
CPNE6-208ENST00000558795 APBB2Q92870 758 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 GPKOWQ92917 476 aaPredicted RBP eCLIP17.74■□□□□ 0.43
CPNE6-208ENST00000558795 MTMR8Q96EF0 704 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 MAD2L2Q9UI95 211 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 COL4A6Q14031 1691 aa17.74■□□□□ 0.43
CPNE6-208ENST00000558795 SETD4Q9NVD3 440 aa17.73■□□□□ 0.43
CPNE6-208ENST00000558795 CLDND1Q9NY35 253 aa17.73■□□□□ 0.43
CPNE6-208ENST00000558795 PRKAG3Q9UGI9 489 aa17.73■□□□□ 0.43
CPNE6-208ENST00000558795 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
CPNE6-208ENST00000558795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.72■□□□□ 0.43
CPNE6-208ENST00000558795 PALM3A6NDB9 673 aaPredicted RBP17.72■□□□□ 0.43
CPNE6-208ENST00000558795 CTNNB1P35222 781 aa17.72■□□□□ 0.43
CPNE6-208ENST00000558795 NEDD9Q14511 834 aa17.72■□□□□ 0.43
CPNE6-208ENST00000558795 FIBCD1Q8N539 461 aa17.72■□□□□ 0.43
CPNE6-208ENST00000558795 IL17RAQ96F46 866 aa17.72■□□□□ 0.43
CPNE6-208ENST00000558795 PIGSQ96S52 555 aa17.72■□□□□ 0.43
CPNE6-208ENST00000558795 PIEZO1Q92508 2521 aa17.72■□□□□ 0.43
CPNE6-208ENST00000558795 NCK2O43639 380 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 STAM2O75886 525 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 SEC23AQ15436 765 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 TTC22Q5TAA0 569 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 METTL7BQ6UX53 244 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 CYFIP1Q7L576 1253 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 OSBPL7Q9BZF2 842 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 BCAS3Q9H6U6 928 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 DOCK5Q9H7D0 1870 aa17.71■□□□□ 0.43
CPNE6-208ENST00000558795 ARHGAP4P98171 946 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 ZP2Q05996 745 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 TRDNQ13061 729 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 COL19A1Q14993 1142 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 UTP14CQ5TAP6 766 aaKnown RBP17.7■□□□□ 0.42
CPNE6-208ENST00000558795 RPAINQ86UA6 219 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 INPP4AQ96PE3 977 aaPredicted RBP17.7■□□□□ 0.42
CPNE6-208ENST00000558795 GPR20Q99678 358 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 C11orf84Q9BUA3 381 aaPredicted RBP17.7■□□□□ 0.42
CPNE6-208ENST00000558795 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
CPNE6-208ENST00000558795 RIOX1Q9H6W3 641 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 RWDD3Q9Y3V2 267 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 KAT6AQ92794 2004 aa17.7■□□□□ 0.42
CPNE6-208ENST00000558795 BAZ2BQ9UIF8 2168 aaKnown RBP17.7■□□□□ 0.42
CPNE6-208ENST00000558795 PNMA6FA0A0J9YX94 578 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms