RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 SELPP16109 830 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 UBA1P22314 1058 aaKnown RBP13.3□□□□□ -0.28
CASC4-205ENST00000558735 ICAM3P32942 547 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 KIF5BP33176 963 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 LIFRP42702 1097 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 RBL2Q08999 1139 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
CASC4-205ENST00000558735 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
CASC4-205ENST00000558735 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
CASC4-205ENST00000558735 WNT8BQ93098 351 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
CASC4-205ENST00000558735 LZTS2Q9BRK4 669 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 KATNAL1Q9BW62 490 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 MLXIPQ9HAP2 919 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 CD320Q9NPF0 282 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 SCN5AQ14524 2016 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 TRIP12Q14669 1992 aaPredicted RBP13.29□□□□□ -0.28
CASC4-205ENST00000558735 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.29□□□□□ -0.28
CASC4-205ENST00000558735 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 PRR33A8MZF0 331 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 NBNO60934 754 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 RXRAP19793 462 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 GNAQP50148 359 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 SEMA3FQ13275 785 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 PTK7Q13308 1070 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 TCTN1Q2MV58 587 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 TRAF7Q6Q0C0 670 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 NFXL1Q6ZNB6 911 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 CCDC155Q8N6L0 562 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 INPP4AQ96PE3 977 aaPredicted RBP13.29□□□□□ -0.28
CASC4-205ENST00000558735 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 TELO2Q9Y4R8 837 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 FRMPD4Q14CM0 1322 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 MYH7BA7E2Y1 1941 aa13.29□□□□□ -0.28
CASC4-205ENST00000558735 H3BRB1 525 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 STAM2O75886 525 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 PARNO95453 639 aaKnown RBP13.28□□□□□ -0.28
CASC4-205ENST00000558735 CXCL10P02778 98 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 BMP2KLQ5H9B9 411 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 ZNF618Q5T7W0 954 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 CYFIP1Q7L576 1253 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 TUT1Q9H6E5 874 aaKnown RBP13.28□□□□□ -0.28
CASC4-205ENST00000558735 ANO2Q9NQ90 1003 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 BRWD1Q9NSI6 2320 aa13.28□□□□□ -0.28
CASC4-205ENST00000558735 WDFY4Q6ZS81 3184 aa13.27□□□□□ -0.28
CASC4-205ENST00000558735 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 CALM1P0DP23 149 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 CALM2P0DP24 149 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 CALM3P0DP25 149 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 EXOSC10Q01780 885 aaKnown RBP13.27□□□□□ -0.29
CASC4-205ENST00000558735 NEDD9Q14511 834 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 MBTPS1Q14703 1052 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 GNPTABQ3T906 1256 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 LEXMQ3ZCV2 418 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 PCNX4Q63HM2 1172 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 SMARCC2Q8TAQ2 1214 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 CUL5Q93034 780 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 RNPEPQ9H4A4 650 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 PSTPIP2Q9H939 334 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.29
CASC4-205ENST00000558735 FIBPO43427 364 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 LGALS2P05162 132 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 HOXC8P31273 242 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 KCNJ6P48051 423 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 ERVK-21P61565 698 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
CASC4-205ENST00000558735 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 METTL7BQ6UX53 244 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 CENPQQ7L2Z9 268 aaPredicted RBP13.26□□□□□ -0.29
CASC4-205ENST00000558735 SPRED2Q7Z698 418 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 TMCO2Q7Z6W1 182 aaPredicted RBP13.26□□□□□ -0.29
CASC4-205ENST00000558735 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 NEK1Q96PY6 1258 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 RAD9AQ99638 391 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 GPR20Q99678 358 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 SENP7Q9BQF6 1050 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 USP26Q9BXU7 913 aa13.26□□□□□ -0.29
CASC4-205ENST00000558735 UBE2ZQ9H832 354 aaPredicted RBP13.26□□□□□ -0.29
CASC4-205ENST00000558735 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
CASC4-205ENST00000558735 TRIOO75962 3097 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 ABHD14A-ACY1A0A1B0GW23 586 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 LCHNA4D1U4 455 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 FAM86C2PA6NEL3 165 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 NOP56O00567 594 aaKnown RBP13.25□□□□□ -0.29
CASC4-205ENST00000558735 TREHO43280 583 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 ATP9AO75110 1047 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 GJB5O95377 273 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 SMIM10L2AP0DMW4 78 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 SMIM10L2BP0DMW5 78 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 TSGA10IPQ3SY00 556 aa13.25□□□□□ -0.29
CASC4-205ENST00000558735 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms