RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 PKD2L1Q9P0L9 805 aa13.9□□□□□ -0.18
RCCD1-209ENST00000557750 DDX41Q9UJV9 622 aaKnown RBP13.9□□□□□ -0.18
RCCD1-209ENST00000557750 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
RCCD1-209ENST00000557750 SPATA31C2B4DYI2 1134 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 KBTBD13C9JR72 458 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 NKRFO15226 690 aaKnown RBP eCLIP13.89□□□□□ -0.19
RCCD1-209ENST00000557750 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
RCCD1-209ENST00000557750 SORBS3O60504 671 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 TDP2O95551 362 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 TGFB3P10600 412 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 ICAM3P32942 547 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 CIITAP33076 1130 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 SETQ01105 290 aaPredicted RBP13.89□□□□□ -0.19
RCCD1-209ENST00000557750 PLA2G4DQ86XP0 818 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 COPS5Q92905 334 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 AP5M1Q9H0R1 490 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 KCNH7Q9NS40 1196 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 SYNRGQ9UMZ2 1314 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 LTBP2Q14767 1821 aa13.89□□□□□ -0.19
RCCD1-209ENST00000557750 MEIS1O00470 390 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 MAFGO15525 162 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 CCNT1O60563 726 aaKnown RBP13.88□□□□□ -0.19
RCCD1-209ENST00000557750 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
RCCD1-209ENST00000557750 ATP2B1P20020 1258 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 UBA1P22314 1058 aaKnown RBP13.88□□□□□ -0.19
RCCD1-209ENST00000557750 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.193e-10■■■□□ 17.3
RCCD1-209ENST00000557750 SEMA3FQ13275 785 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 NBR1Q14596 966 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 TRIM60Q495X7 471 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 NIPA1Q7RTP0 329 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 OR6J1Q8NGC5 347 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 BADQ92934 168 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 SEMA6BQ9H3T3 888 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 IGLV3-22A0A075B6J6 115 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 STX6O43752 255 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 EDIL3O43854 480 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 GGPS1O95749 300 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 GH1P01241 217 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 ARP10275 920 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 SP2Q02086 613 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 NEDD9Q14511 834 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 SNX17Q15036 470 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 SH3RF1Q7Z6J0 888 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 RNF180Q86T96 592 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 DHX37Q8IY37 1157 aaKnown RBP13.88□□□□□ -0.19
RCCD1-209ENST00000557750 FERMT2Q96AC1 680 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 UIMC1Q96RL1 719 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 NAP1L4Q99733 375 aaKnown RBP13.88□□□□□ -0.19
RCCD1-209ENST00000557750 MLXIPQ9HAP2 919 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 PDLIM7Q9NR12 457 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 DAXXQ9UER7 740 aaPredicted RBP13.88□□□□□ -0.19
RCCD1-209ENST00000557750 DDX25Q9UHL0 483 aaKnown RBP13.88□□□□□ -0.19
RCCD1-209ENST00000557750 Q9Y3F1 56 aa13.88□□□□□ -0.19
RCCD1-209ENST00000557750 LRRC37A2A6NM11 1700 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 MCM3APO60318 1980 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 ATP9AO75110 1047 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 GCFC2P16383 781 aaKnown RBP13.87□□□□□ -0.19
RCCD1-209ENST00000557750 GJA9P57773 515 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 MOXD1Q6UVY6 613 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 FERMT3Q86UX7 667 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
RCCD1-209ENST00000557750 SENP7Q9BQF6 1050 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 ZNF577Q9BSK1 485 aa13.87□□□□□ -0.19
RCCD1-209ENST00000557750 AGO4Q9HCK5 861 aaKnown RBP13.87□□□□□ -0.19
RCCD1-209ENST00000557750 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
RCCD1-209ENST00000557750 CYP3A7-CYP3A51PA0A087WV96 503 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 MYADML2A6NDP7 307 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 ADAMTS4O75173 837 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 KCNA2P16389 499 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 CYP3A7P24462 503 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 CPT1AP50416 773 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 IRX5P78411 483 aaPredicted RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 BEX3Q00994 111 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 SP4Q02446 784 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 ARHGAP1Q07960 439 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 LRRC41Q15345 812 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 Q4G0T1 1027 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 BRDTQ58F21 947 aaPredicted RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 GNASQ5JWF2 1037 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 CELF3Q5SZQ8 465 aaKnown RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 PPP4R3AQ6IN85 833 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 GIMAP8Q8ND71 665 aaPredicted RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 LENG9Q96B70 501 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 SPATA33Q96N06 139 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 SDF4Q9BRK5 362 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 UPF3AQ9H1J1 476 aaKnown RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 TTYH1Q9H313 450 aaPredicted RBP13.86□□□□□ -0.19
RCCD1-209ENST00000557750 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 CDH23Q9H251 3354 aa13.86□□□□□ -0.19
RCCD1-209ENST00000557750 IPO5O00410 1097 aaKnown RBP13.85□□□□□ -0.19
RCCD1-209ENST00000557750 NOP56O00567 594 aaKnown RBP13.85□□□□□ -0.19
RCCD1-209ENST00000557750 SLC37A4O43826 429 aa13.85□□□□□ -0.19
RCCD1-209ENST00000557750 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
RCCD1-209ENST00000557750 SMAD3P84022 425 aaKnown RBP13.85□□□□□ -0.19
RCCD1-209ENST00000557750 TLE2Q04725 743 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms