RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 HFE2Q6ZVN8 426 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 RPAINQ86UA6 219 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 VSIG10LQ86VR7 867 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 ENAHQ8N8S7 591 aaPredicted RBP21.35■■□□□ 1.01
ABCD4-228ENST00000557588 AMNQ9BXJ7 453 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 IFIH1Q9BYX4 1025 aaKnown RBP21.35■■□□□ 1.01
ABCD4-228ENST00000557588 OSBPL7Q9BZF2 842 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 CLDND1Q9NY35 253 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 C5orf67F2Z3F1 127 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 H3BRB1 525 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 TREHO43280 583 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 SORBS3O60504 671 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 KDM4AO75164 1064 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 MYCLP12524 364 aaPredicted RBP21.34■■□□□ 1.01
ABCD4-228ENST00000557588 IRS1P35568 1242 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 PGM5Q15124 567 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 SMAD2Q15796 467 aaKnown RBP21.34■■□□□ 1.01
ABCD4-228ENST00000557588 EP400NLQ6ZTU2 488 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 IL31RAQ8NI17 732 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 APBB2Q92870 758 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 ZSCAN10Q96SZ4 725 aaPredicted RBP21.34■■□□□ 1.01
ABCD4-228ENST00000557588 POP1Q99575 1024 aaKnown RBP21.34■■□□□ 1.01
ABCD4-228ENST00000557588 UPF3BQ9BZI7 483 aaKnown RBP21.34■■□□□ 1.01
ABCD4-228ENST00000557588 TUT1Q9H6E5 874 aaKnown RBP21.34■■□□□ 1.01
ABCD4-228ENST00000557588 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
ABCD4-228ENST00000557588 MYO7AQ13402 2215 aa21.34■■□□□ 1.01
ABCD4-228ENST00000557588 ZNF213O14771 459 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 UPP2O95045 317 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 LGALS2P05162 132 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 CTSHP09668 335 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 LINC00271P0C7V0 271 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 MFAP1P55081 439 aaKnown RBP21.33■■□□□ 1.01
ABCD4-228ENST00000557588 ANKRD45Q5TZF3 282 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 SAMD3Q8N6K7 520 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 LMAN2LQ9H0V9 348 aa21.33■■□□□ 1.01
ABCD4-228ENST00000557588 PPP1R11O60927 126 aaPredicted RBP21.32■■□□□ 1
ABCD4-228ENST00000557588 CTNNB1P35222 781 aa21.32■■□□□ 1
ABCD4-228ENST00000557588 HERC4Q5GLZ8 1057 aaPredicted RBP21.32■■□□□ 1
ABCD4-228ENST00000557588 MTMR8Q96EF0 704 aa21.32■■□□□ 1
ABCD4-228ENST00000557588 C11orf84Q9BUA3 381 aaPredicted RBP21.32■■□□□ 1
ABCD4-228ENST00000557588 RNPEPQ9H4A4 650 aa21.32■■□□□ 1
ABCD4-228ENST00000557588 VAT1LQ9HCJ6 419 aa21.32■■□□□ 1
ABCD4-228ENST00000557588 B4E1Z4 1266 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 RB1P06400 928 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 CCND2P30279 289 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 FAM26DQ5JW98 314 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 FIBCD1Q8N539 461 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 GPKOWQ92917 476 aaPredicted RBP eCLIP21.31■■□□□ 12e-6■■■■■ 39.1
ABCD4-228ENST00000557588 IL17RAQ96F46 866 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 MFSD14AQ96MC6 490 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 MLXIPQ9HAP2 919 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 RC3H2Q9HBD1 1191 aaKnown RBP21.31■■□□□ 1
ABCD4-228ENST00000557588 RWDD3Q9Y3V2 267 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 TECTAO75443 2155 aa21.31■■□□□ 1
ABCD4-228ENST00000557588 ADGRA3Q8IWK6 1321 aa21.3■■□□□ 1
ABCD4-228ENST00000557588 TRIM6-TRIM34B2RNG4 842 aa21.3■■□□□ 1
ABCD4-228ENST00000557588 ZBTB5O15062 677 aa21.3■■□□□ 1
ABCD4-228ENST00000557588 MBTPS2O43462 519 aa21.3■■□□□ 1
ABCD4-228ENST00000557588 HOXA13P31271 388 aaPredicted RBP21.3■■□□□ 1
ABCD4-228ENST00000557588 HYAL1Q12794 435 aa21.3■■□□□ 1
ABCD4-228ENST00000557588 SMAD4Q13485 552 aaKnown RBP21.3■■□□□ 1
ABCD4-228ENST00000557588 USP26Q9BXU7 913 aa21.3■■□□□ 1
ABCD4-228ENST00000557588 MUTYHQ9UIF7 546 aa21.3■■□□□ 1
ABCD4-228ENST00000557588 TBX10O75333 385 aa21.29■■□□□ 1
ABCD4-228ENST00000557588 GNAT1P11488 350 aa21.29■■□□□ 1
ABCD4-228ENST00000557588 DLX2Q07687 328 aaPredicted RBP21.29■■□□□ 1
ABCD4-228ENST00000557588 DIEXFQ68CQ4 756 aaKnown RBP21.29■■□□□ 1
ABCD4-228ENST00000557588 STAG2Q8N3U4 1231 aa21.29■■□□□ 1
ABCD4-228ENST00000557588 CLP1Q92989 425 aaKnown RBP21.29■■□□□ 1
ABCD4-228ENST00000557588 ZSWIM5Q9P217 1185 aa21.29■■□□□ 1
ABCD4-228ENST00000557588 PCDHA1Q9Y5I3 950 aa21.29■■□□□ 1
ABCD4-228ENST00000557588 USP34Q70CQ2 3546 aa21.29■■□□□ 1
ABCD4-228ENST00000557588 FRMPD4Q14CM0 1322 aa21.29■■□□□ 1
ABCD4-228ENST00000557588 DOCK5Q9H7D0 1870 aa21.28■■□□□ 1
ABCD4-228ENST00000557588 NOP56O00567 594 aaKnown RBP21.28■■□□□ 1
ABCD4-228ENST00000557588 GRM6O15303 877 aa21.28■■□□□ 1
ABCD4-228ENST00000557588 BMPR1AP36894 532 aa21.28■■□□□ 1
ABCD4-228ENST00000557588 ADAM17P78536 824 aa21.28■■□□□ 1
ABCD4-228ENST00000557588 METTL7BQ6UX53 244 aa21.28■■□□□ 1
ABCD4-228ENST00000557588 SETD4Q9NVD3 440 aa21.28■■□□□ 1
ABCD4-228ENST00000557588 KLRF2D3W0D1 207 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 MMP1P03956 469 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 ICAM3P32942 547 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 CLUL1Q15846 466 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 GNPTABQ3T906 1256 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 RNF135Q8IUD6 432 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 LMBR1Q8WVP7 490 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 INPP4AQ96PE3 977 aaPredicted RBP21.27■■□□□ 1
ABCD4-228ENST00000557588 GPR20Q99678 358 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 BCAS3Q9H6U6 928 aa21.27■■□□□ 1
ABCD4-228ENST00000557588 ZNF215Q9UL58 517 aaPredicted RBP21.27■■□□□ 1
ABCD4-228ENST00000557588 GCOM1H8Y6P7 765 aaPredicted RBP21.26■□□□□ 0.99
ABCD4-228ENST00000557588 STAM2O75886 525 aa21.26■□□□□ 0.99
ABCD4-228ENST00000557588 POLR2MP0CAP2 368 aa21.26■□□□□ 0.99
ABCD4-228ENST00000557588 SDSP20132 328 aa21.26■□□□□ 0.99
ABCD4-228ENST00000557588 NEDD9Q14511 834 aa21.26■□□□□ 0.99
ABCD4-228ENST00000557588 IFIT1BQ5T764 474 aaKnown RBP21.26■□□□□ 0.99
ABCD4-228ENST00000557588 TRIM50Q86XT4 487 aa21.26■□□□□ 0.99
ABCD4-228ENST00000557588 ZFP91Q96JP5 570 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms