RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 RBL2Q08999 1139 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 BFSP2Q13515 415 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 GPNMBQ14956 572 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 PTGISQ16647 500 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 GDF6Q6KF10 455 aaPredicted RBP12.21□□□□□ -0.45
PSMC6-215ENST00000557517 USP17L6PQ6QN14 398 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 NFXL1Q6ZNB6 911 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.45
PSMC6-215ENST00000557517 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
PSMC6-215ENST00000557517 RETREG2Q8NC44 543 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 C16orf70Q9BSU1 422 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.45
PSMC6-215ENST00000557517 GTF2IRD1Q9UHL9 959 aa12.21□□□□□ -0.45
PSMC6-215ENST00000557517 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
PSMC6-215ENST00000557517 CHD9Q3L8U1 2897 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 GGPS1O95749 300 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 UBA1P22314 1058 aaKnown RBP12.2□□□□□ -0.46
PSMC6-215ENST00000557517 PSEN2P49810 448 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 GNPTABQ3T906 1256 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 PCNX4Q63HM2 1172 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 CAGE1Q8TC20 777 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 ATXN2LQ8WWM7 1075 aaKnown RBP12.2□□□□□ -0.46
PSMC6-215ENST00000557517 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.464e-7■■■■■ 29.5
PSMC6-215ENST00000557517 KCNB2Q92953 911 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 SPATA33Q96N06 139 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 SENP7Q9BQF6 1050 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 KATNAL1Q9BW62 490 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 BCAS3Q9H6U6 928 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 PSTPIP2Q9H939 334 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 HDAC6Q9UBN7 1215 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 SEC63Q9UGP8 760 aaKnown RBP12.2□□□□□ -0.46
PSMC6-215ENST00000557517 SLC4A7Q9Y6M7 1214 aa12.2□□□□□ -0.46
PSMC6-215ENST00000557517 LCTP09848 1927 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 FIBPO43427 364 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 CDC45O75419 566 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 PARNO95453 639 aaKnown RBP12.19□□□□□ -0.46
PSMC6-215ENST00000557517 RXRAP19793 462 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 FUT2Q10981 343 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 NEDD9Q14511 834 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 MFSD10Q14728 455 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 RAB30Q15771 203 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 KIAA0753Q2KHM9 967 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 ADCK5Q3MIX3 580 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 TEX2Q8IWB9 1127 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 SMARCC2Q8TAQ2 1214 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 PHOSPHO2Q8TCD6 241 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 AFAP1L1Q8TED9 768 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 CUL5Q93034 780 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 USP26Q9BXU7 913 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 MLXIPQ9HAP2 919 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 BRPF3Q9ULD4 1205 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 NOD1Q9Y239 953 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 LRRC37A2A6NM11 1700 aa12.19□□□□□ -0.46
PSMC6-215ENST00000557517 H3BRB1 525 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 MAFGO15525 162 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 HMGB1P09429 215 aaKnown RBP12.18□□□□□ -0.46
PSMC6-215ENST00000557517 HOXC8P31273 242 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 PTK7Q13308 1070 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 HIC1Q14526 733 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 KRT32Q14532 448 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 APOA5Q6Q788 366 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 METTL7BQ6UX53 244 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 SYNE3Q6ZMZ3 975 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 CCDC82Q8N4S0 544 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 DHX38Q92620 1227 aaKnown RBP12.18□□□□□ -0.46
PSMC6-215ENST00000557517 ASB2Q96Q27 587 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 TUT1Q9H6E5 874 aaKnown RBP12.18□□□□□ -0.46
PSMC6-215ENST00000557517 THEGQ9P2T0 379 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 MSRAQ9UJ68 235 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 PCDHA11Q9Y5I1 949 aa12.18□□□□□ -0.46
PSMC6-215ENST00000557517 CXCL10P02778 98 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 CKBP12277 381 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 ACTN1P12814 892 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 SELPP16109 830 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 ATP2A2P16615 1042 aaKnown RBP12.17□□□□□ -0.46
PSMC6-215ENST00000557517 RCAN1P53805 252 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 TRIM71Q2Q1W2 868 aaKnown RBP12.17□□□□□ -0.46
PSMC6-215ENST00000557517 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 CCDC155Q8N6L0 562 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 GIMAP8Q8ND71 665 aaPredicted RBP12.17□□□□□ -0.46
PSMC6-215ENST00000557517 ADAMTS19Q8TE59 1207 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 FAM122AQ96E09 287 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 GPR20Q99678 358 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
PSMC6-215ENST00000557517 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
PSMC6-215ENST00000557517 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
PSMC6-215ENST00000557517 YBX2Q9Y2T7 364 aaKnown RBP12.17□□□□□ -0.46
PSMC6-215ENST00000557517 MCM3APO60318 1980 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms