RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 COPS5Q92905 334 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 MTMR8Q96EF0 704 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 TMEM87BQ96K49 555 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 PIGSQ96S52 555 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 MAP3K14Q99558 947 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 ESYT1Q9BSJ8 1104 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 FAM117AQ9C073 453 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 TRPV6Q9H1D0 765 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 ALDH8A1Q9H2A2 487 aaPredicted RBP8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 IL23AQ9NPF7 189 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 ANO2Q9NQ90 1003 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 PXMP2Q9NR77 195 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 COL20A1Q9P218 1284 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 SEC63Q9UGP8 760 aaKnown RBP8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 MRVI1Q9Y6F6 885 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 MYH7BA7E2Y1 1941 aa8.9□□□□□ -0.99
HNRNPC-226ENST00000556628 GCOM1H8Y6P7 765 aaPredicted RBP8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 PRC1O43663 620 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 DDAH1O94760 285 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 ARIH2O95376 493 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 POLR2MP0CAP2 368 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 CALM1P0DP23 149 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 CALM2P0DP24 149 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 CALM3P0DP25 149 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 ACRP10323 421 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 CCND2P30279 289 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 CCL23P55773 120 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 ANTXR2P58335 489 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 TROAPQ12815 778 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 LAMC2Q13753 1193 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 KMT5BQ4FZB7 885 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 BMP2KLQ5H9B9 411 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 NFRKBQ6P4R8 1299 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 TRIM67Q6ZTA4 783 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 ZNF365Q70YC5 407 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 DHX37Q8IY37 1157 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 MB21D2Q8IYB1 491 aaPredicted RBP8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 ZNF654Q8IZM8 581 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 CCDC155Q8N6L0 562 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 RETREG2Q8NC44 543 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 IGDCC4Q8TDY8 1250 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 CUL5Q93034 780 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 RRP36Q96EU6 259 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 LZTS2Q9BRK4 669 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 NOC4LQ9BVI4 516 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 KATNAL1Q9BW62 490 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 SEMA6BQ9H3T3 888 aa8.89□□□□□ -0.99
HNRNPC-226ENST00000556628 SLC27A2O14975 620 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 PPP1R11O60927 126 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 MMP3P08254 477 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 CYP2C9P11712 490 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 ACTN1P12814 892 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 SMARCA1P28370 1054 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 HOXA13P31271 388 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 CLCN1P35523 988 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 GHRHRQ02643 423 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 PGM5Q15124 567 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 DGKDQ16760 1214 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 CREB3L3Q68CJ9 461 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 CCDC62Q6P9F0 684 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 SYNE3Q6ZMZ3 975 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 FCHSD1Q86WN1 690 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 AFG1LQ8WV93 481 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 PIBF1Q8WXW3 757 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 PDCD2LQ9BRP1 358 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 SPZ1Q9BXG8 430 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 LSG1Q9H089 658 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 LY9Q9HBG7 655 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 SENP2Q9HC62 589 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 TRMT13Q9NUP7 481 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 MSRAQ9UJ68 235 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 DDX41Q9UJV9 622 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 TAF6LQ9Y6J9 622 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 SCN10AQ9Y5Y9 1956 aa8.88□□□□□ -0.99
HNRNPC-226ENST00000556628 UMODL1Q5DID0 1318 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 ZBBXA8MT70 800 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 SH2B2O14492 632 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 OPLAHO14841 1288 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 ACTN4O43707 911 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 CYTH3O43739 400 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 TLL1O43897 1013 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 STAM2O75886 525 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 PFKMP08237 780 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 TGFB3P10600 412 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 FOSL2P15408 326 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 RFC2P35250 354 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 ARHGAP1Q07960 439 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 BFSP2Q13515 415 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 RAB30Q15771 203 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 GNPTABQ3T906 1256 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 C16orf59Q7L2K0 433 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 OTOP2Q7RTS6 562 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 ZNF598Q86UK7 904 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 VSIG10LQ86VR7 867 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 C7orf31Q8N865 590 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 SMARCC2Q8TAQ2 1214 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 HERVK_113Q902F9 699 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms