RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 TYRO3Q06418 890 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 ITGB3BPQ13352 177 aaPredicted RBP11.43□□□□□ -0.58
NEK9-205ENST00000555405 POSTNQ15063 836 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 FAM110CQ1W6H9 321 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 ANO6Q4KMQ2 910 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 DOCK3Q8IZD9 2030 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
NEK9-205ENST00000555405 SMARCE1Q969G3 411 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 FAM20AQ96MK3 541 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 EIF2AK1Q9BQI3 630 aaKnown RBP11.43□□□□□ -0.58
NEK9-205ENST00000555405 MYH7BA7E2Y1 1941 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 ASTN1O14525 1302 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 MARK3P27448 753 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 CUL4BQ13620 913 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 PAGE5Q96GU1 130 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 KCNMB3Q9NPA1 279 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 PAPPA2Q9BXP8 1791 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 PHIPQ8WWQ0 1821 aa11.43□□□□□ -0.58
NEK9-205ENST00000555405 NPHP3-ACAD11A0A0J9YXS1 232 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 CYP3A4P08684 503 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 CIITAP33076 1130 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 PRPHP41219 470 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 STX17P56962 302 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 CCL14Q16627 93 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 Q4G0T1 1027 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 HPS3Q969F9 1004 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 EEF2KMTQ96G04 330 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 MPHOSPH6Q99547 160 aaKnown RBP11.42□□□□□ -0.58
NEK9-205ENST00000555405 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
NEK9-205ENST00000555405 CREBZFQ9NS37 354 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 HPSEQ9Y251 543 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 B4DLN1 442 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 NOP56O00567 594 aaKnown RBP11.42□□□□□ -0.58
NEK9-205ENST00000555405 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
NEK9-205ENST00000555405 GGPS1O95749 300 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 TXNP10599 105 aaKnown RBP11.42□□□□□ -0.58
NEK9-205ENST00000555405 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 LRSAM1Q6UWE0 723 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 SV2BQ7L1I2 683 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 FAM133AQ8N9E0 248 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 BEGAINQ9BUH8 593 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 BHMT2Q9H2M3 363 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 AGO4Q9HCK5 861 aaKnown RBP11.42□□□□□ -0.58
NEK9-205ENST00000555405 UBIAD1Q9Y5Z9 338 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 CYP3A7-CYP3A51PA0A087WV96 503 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 BECN2A8MW95 431 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 SLFN14P0C7P3 912 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 CYP3A7P24462 503 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 GRB10Q13322 594 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 ARMCX2Q7L311 632 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 OTOP1Q7RTM1 612 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 DNM3Q9UQ16 869 aa11.42□□□□□ -0.58
NEK9-205ENST00000555405 CA12O43570 354 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 RGS20O76081 388 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 SETQ01105 290 aaPredicted RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 SP2Q02086 613 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 HAUS3Q68CZ6 603 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 DHX37Q8IY37 1157 aaKnown RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 IGSF22Q8N9C0 903 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 NPLOC4Q8TAT6 608 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 CRYGNQ8WXF5 182 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 RBSNQ9H1K0 784 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 MAPK4P31152 587 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
NEK9-205ENST00000555405 GLG1Q92896 1179 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 AK8Q96MA6 479 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 PNMA5Q96PV4 448 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 LETM1O95202 739 aaPredicted RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 ADCYAP1R1P41586 468 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 PDIA5Q14554 519 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 GPBP1Q86WP2 473 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 DNERQ8NFT8 737 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 LRRC15Q8TF66 581 aa11.41□□□□□ -0.58
NEK9-205ENST00000555405 GTF3C2Q8WUA4 911 aaPredicted RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 LARP4BQ92615 738 aaKnown RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 MAP3K20Q9NYL2 800 aaKnown RBP11.41□□□□□ -0.58
NEK9-205ENST00000555405 COL11A1P12107 1806 aaPredicted RBP11.4□□□□□ -0.58
NEK9-205ENST00000555405 RBAK-RBAKDNI3L0D1 243 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 CTAGE5O15320 804 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 PSMD10O75832 226 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 SMC2O95347 1197 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 LUZP1Q86V48 1076 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 LXNQ9BS40 222 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 CCSER1Q9C0I3 900 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 ARIH2O95376 493 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 COPB2P35606 906 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 ZNF165P49910 485 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 NPEPPSP55786 919 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 SEMA3FQ13275 785 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 KIF22Q14807 665 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 DPCR1Q3MIW9 517 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 MOXD1Q6UVY6 613 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 TRIM50Q86XT4 487 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 JPH1Q9HDC5 661 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms