RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ITGB3BPQ13352 177 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-219ENST00000555323 GJC2Q5T442 439 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-219ENST00000555323 B3GNT9Q6UX72 402 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 DHX37Q8IY37 1157 aaKnown RBP14.36□□□□□ -0.11
SYNE2-219ENST00000555323 SLFN12Q8IYM2 578 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 DEFB118Q96PH6 123 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 TMEM60Q9H2L4 133 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 MORC2Q9Y6X9 1032 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-219ENST00000555323 A6NJR5 290 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 PPFIA4O75335 1185 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 ATG7O95352 703 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 GGPS1O95749 300 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-219ENST00000555323 NBR1Q14596 966 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 ATL3Q6DD88 541 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 CCSAPQ6IQ19 270 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-219ENST00000555323 FAM173BQ6P4H8 233 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 CYFIP1Q7L576 1253 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 POTEDQ86YR6 584 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 U2AF1L4Q8WU68 220 aaKnown RBP14.35□□□□□ -0.11
SYNE2-219ENST00000555323 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 AP5M1Q9H0R1 490 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 MLXIPQ9HAP2 919 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 SPC25Q9HBM1 224 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 XPNPEP3Q9NQH7 507 aa14.35□□□□□ -0.11
SYNE2-219ENST00000555323 BAG4O95429 457 aaKnown RBP14.34□□□□□ -0.11
SYNE2-219ENST00000555323 BMP15O95972 392 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-219ENST00000555323 PTGS1P23219 599 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 PRPHP41219 470 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 ATP2C1P98194 919 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-219ENST00000555323 PTGDRQ13258 359 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 CALCRLQ16602 461 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 HSDL1Q3SXM5 330 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 OR6J1Q8NGC5 347 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 PPTC7Q8NI37 304 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 LENG1Q96BZ8 264 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-219ENST00000555323 ABHD8Q96I13 439 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 TSEN34Q9BSV6 310 aaKnown RBP14.34□□□□□ -0.11
SYNE2-219ENST00000555323 JPH1Q9HDC5 661 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-219ENST00000555323 POLR3EQ9NVU0 708 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 SLC9A2Q9UBY0 812 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 SYNRGQ9UMZ2 1314 aa14.34□□□□□ -0.11
SYNE2-219ENST00000555323 KPNA6O60684 536 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 PGK1P00558 417 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 OR52Z1P0C646 297 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 NASPP49321 788 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 CPT1AP50416 773 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 KRT76Q01546 638 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 PPP2R5CQ13362 524 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 PTPAQ15257 358 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 LRRC41Q15345 812 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 SF3A1Q15459 793 aaKnown RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 FSCN1Q16658 493 aaKnown RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 LRCH2Q5VUJ6 765 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 ARL6IP4Q66PJ3 421 aaKnown RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 ZNF746Q6NUN9 644 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 RNF180Q86T96 592 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 AFG1LQ8WV93 481 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 SEPT1Q8WYJ6 367 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 SPATA33Q96N06 139 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 ZNF396Q96N95 335 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-219ENST00000555323 USP28Q96RU2 1077 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 GPR20Q99678 358 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 TEKT3Q9BXF9 490 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 PKD2L1Q9P0L9 805 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 CEP131Q9UPN4 1083 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 ATP6V1DQ9Y5K8 247 aa14.33□□□□□ -0.12
SYNE2-219ENST00000555323 GSTTP1A0A1W2PQM5 241 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 DNM1LO00429 736 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 GAS7O60861 476 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 CCNE2O96020 404 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 MMP3P08254 477 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 C6orf222P0C671 652 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-219ENST00000555323 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-219ENST00000555323 SPIRE1Q08AE8 756 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 BRDTQ58F21 947 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-219ENST00000555323 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 SMAP1Q8IYB5 467 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-219ENST00000555323 ANKLE1Q8NAG6 615 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
SYNE2-219ENST00000555323 RDM1Q8NG50 284 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 GJA10Q969M2 543 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-219ENST00000555323 VAV3Q9UKW4 847 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 CLIC4Q9Y696 253 aa14.32□□□□□ -0.12
SYNE2-219ENST00000555323 IGKV6D-21A0A0A0MT36 114 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 MYADML2A6NDP7 307 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 ZEB2O60315 1214 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 MARCH6O60337 910 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 TFRCP02786 760 aaKnown RBP14.31□□□□□ -0.12
SYNE2-219ENST00000555323 SFNP31947 248 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms