RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
NPC2-205ENST00000554482 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPC2-205ENST00000554482 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
NPC2-205ENST00000554482 TGS1Q96RS0 853 aaKnown RBP12.92□□□□□ -0.34
NPC2-205ENST00000554482 C16orf70Q9BSU1 422 aa12.92□□□□□ -0.34
NPC2-205ENST00000554482 TUT1Q9H6E5 874 aaKnown RBP12.92□□□□□ -0.34
NPC2-205ENST00000554482 RIOX1Q9H6W3 641 aa12.92□□□□□ -0.34
NPC2-205ENST00000554482 SIP14410 1827 aa12.92□□□□□ -0.34
NPC2-205ENST00000554482 E7EWF7 191 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 CYTH3O43739 400 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 SMIM10L2AP0DMW4 78 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 SMIM10L2BP0DMW5 78 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 SP4Q02446 784 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 SERINC5Q86VE9 423 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 DBF4BQ8NFT6 615 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 SMARCC2Q8TAQ2 1214 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 SUGCTQ9HAC7 445 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
NPC2-205ENST00000554482 BAZ2BQ9UIF8 2168 aaKnown RBP12.9□□□□□ -0.34
NPC2-205ENST00000554482 MICAL3Q7RTP6 2002 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 TREHO43280 583 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 CHMLP26374 656 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 ERVK-21P61565 698 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 TROAPQ12815 778 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 NEDD9Q14511 834 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
NPC2-205ENST00000554482 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 TRIM50Q86XT4 487 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
NPC2-205ENST00000554482 CUL5Q93034 780 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 C17orf80Q9BSJ5 609 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 MYL10Q9BUA6 226 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 C1QTNF1Q9BXJ1 281 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
NPC2-205ENST00000554482 ZNF215Q9UL58 517 aaPredicted RBP12.9□□□□□ -0.34
NPC2-205ENST00000554482 INSL6Q9Y581 213 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 DOCK5Q9H7D0 1870 aa12.9□□□□□ -0.34
NPC2-205ENST00000554482 REV3LO60673 3130 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 FIBPO43427 364 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 STAM2O75886 525 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 UPP2O95045 317 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
NPC2-205ENST00000554482 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 SEPT8Q92599 483 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 RRP36Q96EU6 259 aaKnown RBP12.89□□□□□ -0.35
NPC2-205ENST00000554482 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
NPC2-205ENST00000554482 YME1L1Q96TA2 773 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 USP26Q9BXU7 913 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 RNPEPQ9H4A4 650 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 SETD4Q9NVD3 440 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 LMCD1Q9NZU5 365 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
NPC2-205ENST00000554482 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 GNAT1P11488 350 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 KIF5BP33176 963 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 ANTXR2P58335 489 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 PLEKHG4Q58EX7 1191 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 USP17L6PQ6QN14 398 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 ZNF654Q8IZM8 581 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 GPR20Q99678 358 aa12.88□□□□□ -0.35
NPC2-205ENST00000554482 UBE2ZQ9H832 354 aaPredicted RBP12.88□□□□□ -0.35
NPC2-205ENST00000554482 TRANK1O15050 2925 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 SPATA31C2B4DYI2 1134 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 SGSM2O43147 1006 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 CAND2O75155 1236 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 DDAH1O94760 285 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 KCNA5P22460 613 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 HOXC8P31273 242 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 ICAM3P32942 547 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 SEMA3FQ13275 785 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 NLRX1Q86UT6 975 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
NPC2-205ENST00000554482 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 EPHX3Q9H6B9 360 aa12.87□□□□□ -0.35
NPC2-205ENST00000554482 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
NPC2-205ENST00000554482 NCOR1O75376 2440 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 PRC1O43663 620 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 RXRAP19793 462 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
NPC2-205ENST00000554482 HTRA4P83105 476 aaPredicted RBP12.86□□□□□ -0.35
NPC2-205ENST00000554482 PTPROQ16827 1216 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 PCNX4Q63HM2 1172 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 EP400NLQ6ZTU2 488 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 LMBR1Q8WVP7 490 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 IFIH1Q9BYX4 1025 aaKnown RBP12.86□□□□□ -0.35
NPC2-205ENST00000554482 OSBPL7Q9BZF2 842 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 LY9Q9HBG7 655 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 PKD2L1Q9P0L9 805 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 TELO2Q9Y4R8 837 aa12.86□□□□□ -0.35
NPC2-205ENST00000554482 SUPT16HQ9Y5B9 1047 aaKnown RBP12.86□□□□□ -0.35
NPC2-205ENST00000554482 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
NPC2-205ENST00000554482 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms