RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 TMEM60Q9H2L4 133 aa21.85■■□□□ 1.09
PSEN1-207ENST00000553599 CLIC4Q9Y696 253 aa21.85■■□□□ 1.09
PSEN1-207ENST00000553599 HTTP42858 3142 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-207ENST00000553599 DHX15O43143 795 aaKnown RBP21.84■■□□□ 1.09
PSEN1-207ENST00000553599 PSMD10O75832 226 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 GGPS1O95749 300 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 RARBP10826 455 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 KRT76Q01546 638 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 ITGB3BPQ13352 177 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-207ENST00000553599 PTPAQ15257 358 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 TMEM266Q2M3C6 531 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 ZNF333Q96JL9 665 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.84■■□□□ 1.091e-9■■■■■ 54.1
PSEN1-207ENST00000553599 MLXIPQ9HAP2 919 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 JPH1Q9HDC5 661 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-207ENST00000553599 DDX20Q9UHI6 824 aaKnown RBP21.84■■□□□ 1.09
PSEN1-207ENST00000553599 PCDHA12Q9UN75 941 aa21.84■■□□□ 1.09
PSEN1-207ENST00000553599 CAPN2P17655 700 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 STK38Q15208 465 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 FOXD4L6Q3SYB3 417 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-207ENST00000553599 FOXD4L3Q6VB84 417 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-207ENST00000553599 LINC00301Q8NCQ3 95 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 KCNG4Q8TDN1 519 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 FERMT2Q96AC1 680 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 RAB34Q9BZG1 259 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 AP5M1Q9H0R1 490 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 PAK6Q9NQU5 681 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-207ENST00000553599 TFIP11Q9UBB9 837 aaKnown RBP21.83■■□□□ 1.09
PSEN1-207ENST00000553599 SLC9A2Q9UBY0 812 aa21.83■■□□□ 1.09
PSEN1-207ENST00000553599 PPP6R2O75170 966 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 FARP2O94887 1054 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 TXKP42681 527 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 FXR2P51116 673 aaKnown RBP eCLIP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 NKX3-2P78367 333 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 ARHGAP1Q07960 439 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 PPP2R5CQ13362 524 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 PDIA5Q14554 519 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 BRDTQ58F21 947 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 ZNF746Q6NUN9 644 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 DTHD1Q6ZMT9 781 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 CYFIP1Q7L576 1253 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 TLK2Q86UE8 772 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 SMAP1Q8IYB5 467 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 RDM1Q8NG50 284 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 TNPO1Q92973 898 aaKnown RBP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 FTOQ9C0B1 505 aaKnown RBP eCLIP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 UPF3AQ9H1J1 476 aaKnown RBP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 TTC12Q9H892 705 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-207ENST00000553599 PKD2L1Q9P0L9 805 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 RCOR1Q9UKL0 485 aa21.82■■□□□ 1.08
PSEN1-207ENST00000553599 SPTLC2O15270 562 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 ADCY6O43306 1168 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 CCL5P13501 91 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 SFNP31947 248 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 GJA9P57773 515 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 CEBPZQ03701 1054 aaKnown RBP21.81■■□□□ 1.08
PSEN1-207ENST00000553599 B3GNT9Q6UX72 402 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 OR6J1Q8NGC5 347 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 PPTC7Q8NI37 304 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 UNC93B1Q9H1C4 597 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 VAV3Q9UKW4 847 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 STK24Q9Y6E0 443 aa21.81■■□□□ 1.08
PSEN1-207ENST00000553599 DYNC1LI2O43237 492 aaPredicted RBP21.8■■□□□ 1.08
PSEN1-207ENST00000553599 NCLP19338 710 aaKnown RBP21.8■■□□□ 1.08
PSEN1-207ENST00000553599 CPT1AP50416 773 aa21.8■■□□□ 1.08
PSEN1-207ENST00000553599 JAK3P52333 1124 aa21.8■■□□□ 1.08
PSEN1-207ENST00000553599 COPS5Q92905 334 aa21.8■■□□□ 1.08
PSEN1-207ENST00000553599 SPATA33Q96N06 139 aa21.8■■□□□ 1.08
PSEN1-207ENST00000553599 RNF208Q9H0X6 261 aa21.8■■□□□ 1.08
PSEN1-207ENST00000553599 XPNPEP3Q9NQH7 507 aa21.8■■□□□ 1.08
PSEN1-207ENST00000553599 ELP1O95163 1332 aa21.8■■□□□ 1.08
PSEN1-207ENST00000553599 A6NJR5 290 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 WDR64B1ANS9 1081 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 NOP56O00567 594 aaKnown RBP21.79■■□□□ 1.08
PSEN1-207ENST00000553599 SPIRE1Q08AE8 756 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 MTFR1Q15390 333 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 TMEM63BQ5T3F8 832 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 LHX8Q68G74 356 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 CLEC17AQ6ZS10 378 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 KRI1Q8N9T8 703 aaKnown RBP21.79■■□□□ 1.08
PSEN1-207ENST00000553599 SPATA32Q96LK8 384 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 AK8Q96MA6 479 aa21.79■■□□□ 1.08
PSEN1-207ENST00000553599 SRPRBQ9Y5M8 271 aaKnown RBP21.79■■□□□ 1.08
PSEN1-207ENST00000553599 PPFIA4O75335 1185 aa21.78■■□□□ 1.08
PSEN1-207ENST00000553599 ATG7O95352 703 aa21.78■■□□□ 1.08
PSEN1-207ENST00000553599 HOXD8P13378 290 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-207ENST00000553599 CST5P28325 142 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-207ENST00000553599 LONP1P36776 959 aaKnown RBP21.78■■□□□ 1.08
PSEN1-207ENST00000553599 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-207ENST00000553599 IGSF22Q8N9C0 903 aa21.78■■□□□ 1.08
PSEN1-207ENST00000553599 LEO1Q8WVC0 666 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-207ENST00000553599 SEPT1Q8WYJ6 367 aa21.78■■□□□ 1.08
PSEN1-207ENST00000553599 GJA10Q969M2 543 aa21.78■■□□□ 1.08
PSEN1-207ENST00000553599 UNC45AQ9H3U1 944 aa21.78■■□□□ 1.08
PSEN1-207ENST00000553599 PCDHA10Q9Y5I2 948 aa21.78■■□□□ 1.08
PSEN1-207ENST00000553599 SYNRGQ9UMZ2 1314 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms