RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PKN1Q16512 942 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 TRIM71Q2Q1W2 868 aaKnown RBP20.93■□□□□ 0.94
SHMT2-206ENST00000553529 TRAF7Q6Q0C0 670 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 SESTD1Q86VW0 696 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 C7orf31Q8N865 590 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 ZBTB10Q96DT7 871 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 USP26Q9BXU7 913 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 NKX2-4Q9H2Z4 354 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 STXBP5LQ9Y2K9 1186 aa20.93■□□□□ 0.94
SHMT2-206ENST00000553529 ARHGEF15O94989 841 aa20.92■□□□□ 0.94
SHMT2-206ENST00000553529 KCNA2P16389 499 aa20.92■□□□□ 0.94
SHMT2-206ENST00000553529 PTPN11Q06124 597 aaPredicted RBP20.92■□□□□ 0.94
SHMT2-206ENST00000553529 UBIAD1Q9Y5Z9 338 aa20.92■□□□□ 0.94
SHMT2-206ENST00000553529 NBNO60934 754 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 SMIM10L2AP0DMW4 78 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 SMIM10L2BP0DMW5 78 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 MBTPS1Q14703 1052 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 METTL7BQ6UX53 244 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 SPRED2Q7Z698 418 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 RASGRP4Q8TDF6 673 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 TIFAQ96CG3 184 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 SEZ6LQ9BYH1 1024 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 ANO3Q9BYT9 981 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 RIC8AQ9NPQ8 531 aa20.91■□□□□ 0.94
SHMT2-206ENST00000553529 SMCO2A6NFE2 343 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 SPDYE3A6NKU9 549 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 PPFIA4O75335 1185 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 REC8O95072 547 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 HMGB1P09429 215 aaKnown RBP20.9■□□□□ 0.94
SHMT2-206ENST00000553529 ARP10275 920 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 TGFB3P10600 412 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 CKBP12277 381 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 NTRK3Q16288 839 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 GNPTABQ3T906 1256 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 ZNF618Q5T7W0 954 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 JAKMIP3Q5VZ66 844 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 KCNV1Q6PIU1 500 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 AGXT2Q9BYV1 514 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 BARHL2Q9NY43 387 aa20.9■□□□□ 0.94
SHMT2-206ENST00000553529 GSTTP1A0A1W2PQM5 241 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 H3BRB1 525 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 NOP56O00567 594 aaKnown RBP20.89■□□□□ 0.93
SHMT2-206ENST00000553529 TREHO43280 583 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 MARK3P27448 753 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 PDIA3P30101 505 aaKnown RBP20.89■□□□□ 0.93
SHMT2-206ENST00000553529 CLK2P49760 499 aaKnown RBP20.89■□□□□ 0.93
SHMT2-206ENST00000553529 ADCY7P51828 1080 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 RNPEPQ9H4A4 650 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 ZNF576Q9H609 170 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 TUT1Q9H6E5 874 aaKnown RBP20.89■□□□□ 0.93
SHMT2-206ENST00000553529 SETD4Q9NVD3 440 aa20.89■□□□□ 0.93
SHMT2-206ENST00000553529 NID2Q14112 1375 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 PITPNM1O00562 1244 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 STK3Q13188 491 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 MTMR1Q13613 665 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 NEDD9Q14511 834 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 PFKFB3Q16875 520 aaPredicted RBP20.88■□□□□ 0.93
SHMT2-206ENST00000553529 RUFY3Q7L099 469 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 LRRC8DQ7L1W4 858 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 RETREG2Q8NC44 543 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 KATNAL1Q9BW62 490 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 FTOQ9C0B1 505 aaKnown RBP eCLIP20.88■□□□□ 0.93
SHMT2-206ENST00000553529 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 SIP14410 1827 aa20.88■□□□□ 0.93
SHMT2-206ENST00000553529 STAM2O75886 525 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 CTSHP09668 335 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 SCG2P13521 617 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 TCF7P36402 384 aaPredicted RBP20.87■□□□□ 0.93
SHMT2-206ENST00000553529 ITGB3BPQ13352 177 aaPredicted RBP20.87■□□□□ 0.93
SHMT2-206ENST00000553529 BFSP2Q13515 415 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 NLRX1Q86UT6 975 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 USP38Q8NB14 1042 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 GPRASP2Q96D09 838 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 AIFM3Q96NN9 605 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 PCYT2Q99447 389 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 SLC26A6Q9BXS9 759 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 PRDM12Q9H4Q4 367 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 JADE2Q9NQC1 790 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 SLC4A7Q9Y6M7 1214 aa20.87■□□□□ 0.93
SHMT2-206ENST00000553529 DDX39AO00148 427 aaKnown RBP20.86■□□□□ 0.93
SHMT2-206ENST00000553529 SELPP16109 830 aa20.86■□□□□ 0.93
SHMT2-206ENST00000553529 DEFB103AP81534 67 aa20.86■□□□□ 0.93
SHMT2-206ENST00000553529 RUFY4Q6ZNE9 571 aa20.86■□□□□ 0.93
SHMT2-206ENST00000553529 RPUSD2Q8IZ73 545 aaKnown RBP20.86■□□□□ 0.93
SHMT2-206ENST00000553529 SLC17A8Q8NDX2 589 aa20.86■□□□□ 0.93
SHMT2-206ENST00000553529 MXRA8Q9BRK3 442 aa20.86■□□□□ 0.93
SHMT2-206ENST00000553529 CERS4Q9HA82 394 aa20.86■□□□□ 0.93
SHMT2-206ENST00000553529 VPS54Q9P1Q0 977 aa20.86■□□□□ 0.93
SHMT2-206ENST00000553529 C17orf102A2RUQ5 167 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 FAM86B1E9PN63 330 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 EDIL3O43854 480 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 SEC24BO95487 1268 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 FAM86B2P0C5J1 330 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 ATP2A2P16615 1042 aaKnown RBP20.85■□□□□ 0.93
SHMT2-206ENST00000553529 HOXC8P31273 242 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 THPOP40225 353 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 PTK7Q13308 1070 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 ADGRE1Q14246 886 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 PPP1R18Q6NYC8 613 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 SERINC5Q86VE9 423 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms