RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-208ENST00000552984 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
TUBA1B-208ENST00000552984 INPP4AQ96PE3 977 aaPredicted RBP13.26□□□□□ -0.29
TUBA1B-208ENST00000552984 OSBPL7Q9BZF2 842 aa13.26□□□□□ -0.29
TUBA1B-208ENST00000552984 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-208ENST00000552984 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 BAIAP3O94812 1187 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 CXCL10P02778 98 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 SMIM10L2AP0DMW4 78 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 SMIM10L2BP0DMW5 78 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 TRAF1Q13077 416 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 GNPTABQ3T906 1256 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 MAP3K14Q99558 947 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 GPR20Q99678 358 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 KIAA1671Q9BY89 1806 aa13.25□□□□□ -0.29
TUBA1B-208ENST00000552984 EVPLQ92817 2033 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 SPATA31C2B4DYI2 1134 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 H3BRB1 525 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 NOP56O00567 594 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 TREHO43280 583 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 FIBPO43427 364 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 TLL1O43897 1013 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 CTSHP09668 335 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 TGFB3P10600 412 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 ICAM3P32942 547 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 THPOP40225 353 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 KCNJ6P48051 423 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 BMP2KLQ5H9B9 411 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 TJAP1Q5JTD0 557 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 FAM117BQ6P1L5 589 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 METTL7BQ6UX53 244 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 TMTC3Q6ZXV5 915 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 SERINC5Q86VE9 423 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 CUL5Q93034 780 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 ATP6V0A1Q93050 837 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 TUT1Q9H6E5 874 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 THEGQ9P2T0 379 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 RALGAPA2Q2PPJ7 1873 aa13.24□□□□□ -0.29
TUBA1B-208ENST00000552984 MYH9P35579 1960 aaKnown RBP13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 C17orf102A2RUQ5 167 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 PIK3CDO00329 1044 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 ATP9AO75110 1047 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 HOXC8P31273 242 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 LIFRP42702 1097 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.23□□□□□ -0.294e-10■■■■■ 30.9
TUBA1B-208ENST00000552984 HEATR3Q7Z4Q2 680 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 FANCBQ8NB91 859 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 PGBD1Q96JS3 809 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 RNPEPQ9H4A4 650 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
TUBA1B-208ENST00000552984 STAM2O75886 525 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 ITGB5P18084 799 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 GNAQP50148 359 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 TFF2Q03403 129 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 NEDD9Q14511 834 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 GDPD5Q8WTR4 605 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 LMBR1Q8WVP7 490 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 PSTPIP2Q9H939 334 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 SETD4Q9NVD3 440 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 MTCH2Q9Y6C9 303 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 MYO7AQ13402 2215 aa13.22□□□□□ -0.29
TUBA1B-208ENST00000552984 RSPH10B2B2RC85 870 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 LPXNO60711 386 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 LGR5O75473 907 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 RSPH10BP0C881 870 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 CALM1P0DP23 149 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 CALM2P0DP24 149 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 CALM3P0DP25 149 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 CPA1P15085 419 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 KCNA2P16389 499 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 GRB10Q13322 594 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 CENPQQ7L2Z9 268 aaPredicted RBP13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 SGMS1Q86VZ5 419 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 DBF4BQ8NFT6 615 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 NECAB3Q96P71 396 aaPredicted RBP13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 NEK1Q96PY6 1258 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.29
TUBA1B-208ENST00000552984 ABHD14A-ACY1A0A1B0GW23 586 aa13.2□□□□□ -0.3
TUBA1B-208ENST00000552984 KIF28PB7ZC32 967 aa13.2□□□□□ -0.3
TUBA1B-208ENST00000552984 GJB5O95377 273 aa13.2□□□□□ -0.3
TUBA1B-208ENST00000552984 PARNO95453 639 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms