RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 POLR2MP0CAP2 368 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 CKBP12277 381 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 WDR5P61964 334 aaKnown RBP10.07□□□□□ -0.8
TMEM116-217ENST00000552801 NUCB1Q02818 461 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 TFF2Q03403 129 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 TAP1Q03518 808 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 PTK7Q13308 1070 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 GNPTABQ3T906 1256 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 FAM117BQ6P1L5 589 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 FCHSD1Q86WN1 690 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 SAMD3Q8N6K7 520 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 TBC1D5Q92609 795 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 ANKS1AQ92625 1134 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 CUL5Q93034 780 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 GTF2IRD1Q9UHL9 959 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 MTUS1Q9ULD2 1270 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 MTCH2Q9Y6C9 303 aa10.07□□□□□ -0.8
TMEM116-217ENST00000552801 IFIT3O14879 490 aaKnown RBP10.06□□□□□ -0.8
TMEM116-217ENST00000552801 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 GGPS1O95749 300 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 GNAT1P11488 350 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
TMEM116-217ENST00000552801 THPOP40225 353 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 FOSBP53539 338 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 CATIPQ7Z7H3 387 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 EMID1Q96A84 441 aaPredicted RBP10.06□□□□□ -0.8
TMEM116-217ENST00000552801 TGS1Q96RS0 853 aaKnown RBP10.06□□□□□ -0.8
TMEM116-217ENST00000552801 RAD9AQ99638 391 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 OSBPL3Q9H4L5 887 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 COL20A1Q9P218 1284 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 PRUNE2Q8WUY3 3088 aa10.06□□□□□ -0.8
TMEM116-217ENST00000552801 C17orf102A2RUQ5 167 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 RSPH10B2B2RC85 870 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 F2P00734 622 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 RSPH10BP0C881 870 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 TGFB3P10600 412 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 HSD17B4P51659 736 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 KCNQ1P51787 676 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 GRB10Q13322 594 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 WTAPQ15007 396 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 CELF3Q5SZQ8 465 aaKnown RBP10.05□□□□□ -0.8
TMEM116-217ENST00000552801 DDX12PQ92771 950 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 KAT2BQ92831 832 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 ATP6V0A1Q93050 837 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 PDCD2LQ9BRP1 358 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 SEC63Q9UGP8 760 aaKnown RBP10.05□□□□□ -0.8
TMEM116-217ENST00000552801 ZNF215Q9UL58 517 aaPredicted RBP10.05□□□□□ -0.8
TMEM116-217ENST00000552801 CDH23Q9H251 3354 aa10.05□□□□□ -0.8
TMEM116-217ENST00000552801 LGR5O75473 907 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 GJB5O95377 273 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 POU3F3P20264 500 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-217ENST00000552801 DEFB103AP81534 67 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 NEDD9Q14511 834 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 PGM5Q15124 567 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 PTPROQ16827 1216 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 ZNF618Q5T7W0 954 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 MYOCDQ8IZQ8 938 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 STAG2Q8N3U4 1231 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 NCOA7Q8NI08 942 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 CTCFLQ8NI51 663 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-217ENST00000552801 SMARCC2Q8TAQ2 1214 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 GDPD5Q8WTR4 605 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 PIBF1Q8WXW3 757 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 SEPT8Q92599 483 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 FAM122AQ96E09 287 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 NECAB3Q96P71 396 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-217ENST00000552801 YME1L1Q96TA2 773 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 LMCD1Q9NZU5 365 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 HCN4Q9Y3Q4 1203 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 INSL6Q9Y581 213 aa10.04□□□□□ -0.8
TMEM116-217ENST00000552801 PNMA6FA0A0J9YX94 578 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 H3BRB1 525 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 NBNO60934 754 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 STAM2O75886 525 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 BMP1P13497 986 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 KIF5BP33176 963 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 MYSM1Q5VVJ2 828 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 KRT40Q6A162 431 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 CASC1Q6TDU7 716 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 NFXL1Q6ZNB6 911 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 EP400NLQ6ZTU2 488 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 STOX1Q6ZVD7 989 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 TMCO2Q7Z6W1 182 aaPredicted RBP10.03□□□□□ -0.8
TMEM116-217ENST00000552801 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
TMEM116-217ENST00000552801 PIGSQ96S52 555 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 USP26Q9BXU7 913 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 TUT1Q9H6E5 874 aaKnown RBP10.03□□□□□ -0.8
TMEM116-217ENST00000552801 MAD2L2Q9UI95 211 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 TET1Q8NFU7 2136 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 KAT6AQ92794 2004 aa10.03□□□□□ -0.8
TMEM116-217ENST00000552801 PRRC2BQ5JSZ5 2229 aaKnown RBP10.03□□□□□ -0.8
TMEM116-217ENST00000552801 LCHNA4D1U4 455 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 PALM3A6NDB9 673 aaPredicted RBP10.02□□□□□ -0.8
TMEM116-217ENST00000552801 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 EPOPA6NHQ4 379 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 UPP2O95045 317 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 IGHDP01880 384 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms