RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 SMC3Q9UQE7 1217 aa15.96■□□□□ 0.15
SMARCC2-212ENST00000552566 PNMA6FA0A0J9YX94 578 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 RGS20O76081 388 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 CA3P07451 260 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 CCND2P30279 289 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 ADD1P35611 737 aaKnown RBP15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 MFSD10Q14728 455 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 PGM5Q15124 567 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 VSIG10LQ86VR7 867 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 PPTC7Q8NI37 304 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 SYMPKQ92797 1274 aaKnown RBP15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 INTS4Q96HW7 963 aaKnown RBP15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 KATNAL1Q9BW62 490 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 RIOX1Q9H6W3 641 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 CERS4Q9HA82 394 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 HDAC6Q9UBN7 1215 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 UNC80Q8N2C7 3258 aa15.95■□□□□ 0.14
SMARCC2-212ENST00000552566 CYTH3O43739 400 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 LARGE1O95461 756 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 GGPS1O95749 300 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 SELPP16109 830 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 HMGN5P82970 282 aaKnown RBP15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 GHRHRQ02643 423 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 SSRP1Q08945 709 aaKnown RBP15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 CUL4AQ13619 759 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 KIAA0753Q2KHM9 967 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 CELF3Q5SZQ8 465 aaKnown RBP15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 KCNV1Q6PIU1 500 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 LRRC8DQ7L1W4 858 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 SESTD1Q86VW0 696 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 SPRYD3Q8NCJ5 442 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 AFAP1L1Q8TED9 768 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 EMID1Q96A84 441 aaPredicted RBP15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 SLC9A7Q96T83 725 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 MLXIPQ9HAP2 919 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 GTF2IRD1Q9UHL9 959 aa15.94■□□□□ 0.14
SMARCC2-212ENST00000552566 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 RFXAPO00287 272 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 SMARCA1P28370 1054 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 KCNJ6P48051 423 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 SP2Q02086 613 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 TJAP1Q5JTD0 557 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 MYSM1Q5VVJ2 828 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 CCDC82Q8N4S0 544 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 SAMD3Q8N6K7 520 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 WASF1Q92558 559 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 DHX38Q92620 1227 aaKnown RBP15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 GPKOWQ92917 476 aaPredicted RBP eCLIP15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 CTAGE1Q96RT6 745 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 LCTP09848 1927 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 EYSQ5T1H1 3165 aa15.93■□□□□ 0.14
SMARCC2-212ENST00000552566 NID2Q14112 1375 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 PPFIA4O75335 1185 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 F2P00734 622 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 CKBP12277 381 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 IFNAR1P17181 557 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 UBA1P22314 1058 aaKnown RBP15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 CDC27P30260 824 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 ZNF200P98182 395 aaPredicted RBP15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 HSDL1Q3SXM5 330 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 TMTC3Q6ZXV5 915 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 HERC6Q8IVU3 1022 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 PHOSPHO2Q8TCD6 241 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 RTEL1Q9NZ71 1219 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 THEGQ9P2T0 379 aa15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 SEC63Q9UGP8 760 aaKnown RBP15.92■□□□□ 0.14
SMARCC2-212ENST00000552566 CDH23Q9H251 3354 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 RBAK-RBAKDNI3L0D1 243 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 BAIAP3O94812 1187 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 PTK7Q13308 1070 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 GPNMBQ14956 572 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 SKIV2LQ15477 1246 aaKnown RBP15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 TMCO2Q7Z6W1 182 aaPredicted RBP15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 ARNTL2Q8WYA1 636 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 ZBED2Q9BTP6 218 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 SLC26A6Q9BXS9 759 aa15.91■□□□□ 0.14
SMARCC2-212ENST00000552566 HAS3O00219 553 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 NOP56O00567 594 aaKnown RBP15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 TLL1O43897 1013 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 PLEKHA8P1O95397 391 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 TGFB3P10600 412 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 XBP1P17861 261 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 PDCP20941 246 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 GNPTABQ3T906 1256 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 ATXN2LQ8WWM7 1075 aaKnown RBP15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 CUL5Q93034 780 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 WNT8BQ93098 351 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 SPZ1Q9BXG8 430 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 RNF26Q9BY78 433 aaPredicted RBP15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 BCAS3Q9H6U6 928 aa15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 FAM217BQ9NTX9 383 aaPredicted RBP15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 ORC3Q9UBD5 711 aaPredicted RBP15.9■□□□□ 0.14
SMARCC2-212ENST00000552566 PRPF3O43395 683 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms