RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 LRRC8DQ7L1W4 858 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 CMTR1Q8N1G2 835 aaKnown RBP10.47□□□□□ -0.73
LETMD1-228ENST00000550929 PPTC7Q8NI37 304 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 WNT8BQ93098 351 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 SPATA33Q96N06 139 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 MLXIPQ9HAP2 919 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 GTF2IRD1Q9UHL9 959 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 PRUNE2Q8WUY3 3088 aa10.47□□□□□ -0.73
LETMD1-228ENST00000550929 PRC1O43663 620 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 CKBP12277 381 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 SELPP16109 830 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 UBA1P22314 1058 aaKnown RBP10.46□□□□□ -0.74
LETMD1-228ENST00000550929 RFC2P35250 354 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 GHRHRQ02643 423 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 KRT40Q6A162 431 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 CASC1Q6TDU7 716 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 SPRED2Q7Z698 418 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 SESTD1Q86VW0 696 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 ZNF654Q8IZM8 581 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 CCDC155Q8N6L0 562 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 TMC2Q8TDI7 906 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 AFAP1L1Q8TED9 768 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 ARNTL2Q8WYA1 636 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 LRRC2Q9BYS8 371 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 LY9Q9HBG7 655 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 TELO2Q9Y4R8 837 aa10.46□□□□□ -0.74
LETMD1-228ENST00000550929 SCN10AQ9Y5Y9 1956 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 SCN5AQ14524 2016 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 EPOPA6NHQ4 379 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 HAS3O00219 553 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 SLC27A2O14975 620 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 NBNO60934 754 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 PLEKHA8P1O95397 391 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 F2P00734 622 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 DEFB103AP81534 67 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 MRPS9P82933 396 aaKnown RBP10.45□□□□□ -0.74
LETMD1-228ENST00000550929 SP4Q02446 784 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 ZNF618Q5T7W0 954 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 FAM117BQ6P1L5 589 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 USP17L6PQ6QN14 398 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 HERC6Q8IVU3 1022 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 CCDC82Q8N4S0 544 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 CTCFLQ8NI51 663 aaPredicted RBP10.45□□□□□ -0.74
LETMD1-228ENST00000550929 CAGE1Q8TC20 777 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 EMID1Q96A84 441 aaPredicted RBP10.45□□□□□ -0.74
LETMD1-228ENST00000550929 SLC9A7Q96T83 725 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 KATNAL1Q9BW62 490 aa10.45□□□□□ -0.74
LETMD1-228ENST00000550929 LSG1Q9H089 658 aaKnown RBP10.45□□□□□ -0.74
LETMD1-228ENST00000550929 MAP3K20Q9NYL2 800 aaKnown RBP10.45□□□□□ -0.74
LETMD1-228ENST00000550929 LCHNA4D1U4 455 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 CCDC69A6NI79 296 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 KIF28PB7ZC32 967 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 TLL1O43897 1013 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 PPFIA4O75335 1185 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 KCNJ6P48051 423 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 WDR5P61964 334 aaKnown RBP10.44□□□□□ -0.74
LETMD1-228ENST00000550929 TAP1Q03518 808 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 TRAF1Q13077 416 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 SEMA3FQ13275 785 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 PTK7Q13308 1070 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 SKIV2LQ15477 1246 aaKnown RBP10.44□□□□□ -0.74
LETMD1-228ENST00000550929 TRIM71Q2Q1W2 868 aaKnown RBP10.44□□□□□ -0.74
LETMD1-228ENST00000550929 UTP14CQ5TAP6 766 aaKnown RBP10.44□□□□□ -0.74
LETMD1-228ENST00000550929 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 CYFIP1Q7L576 1253 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 SRBD1Q8N5C6 995 aaKnown RBP10.44□□□□□ -0.74
LETMD1-228ENST00000550929 SAMD3Q8N6K7 520 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 SMARCC2Q8TAQ2 1214 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 RRP36Q96EU6 259 aaKnown RBP10.44□□□□□ -0.74
LETMD1-228ENST00000550929 PKNOX2Q96KN3 472 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 ESYT1Q9BSJ8 1104 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 C16orf70Q9BSU1 422 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 ZBED2Q9BTP6 218 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 THEGQ9P2T0 379 aa10.44□□□□□ -0.74
LETMD1-228ENST00000550929 NOP56O00567 594 aaKnown RBP10.43□□□□□ -0.74
LETMD1-228ENST00000550929 SH2B2O14492 632 aaPredicted RBP10.43□□□□□ -0.74
LETMD1-228ENST00000550929 LGALS2P05162 132 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 TGFB3P10600 412 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 MCM5P33992 734 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 THPOP40225 353 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 MBTPS1Q14703 1052 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 UBE2SQ16763 222 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 GNPTABQ3T906 1256 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 CREB3L3Q68CJ9 461 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 CNKSR3Q6P9H4 555 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 TRAF7Q6Q0C0 670 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 TRIM50Q86XT4 487 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 PHOSPHO2Q8TCD6 241 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 SYMPKQ92797 1274 aaKnown RBP10.43□□□□□ -0.74
LETMD1-228ENST00000550929 CUL5Q93034 780 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 OSBPL7Q9BZF2 842 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 ANO2Q9NQ90 1003 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 PCDHGA4Q9Y5G9 962 aa10.43□□□□□ -0.74
LETMD1-228ENST00000550929 GBF1Q92538 1859 aa10.42□□□□□ -0.74
LETMD1-228ENST00000550929 C17orf102A2RUQ5 167 aa10.42□□□□□ -0.74
LETMD1-228ENST00000550929 SPATA31C2B4DYI2 1134 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms