RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 GJD2Q9UKL4 321 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 CD44P16070 742 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 CYP2B6P20813 491 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 CUL4BQ13620 913 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 COG2Q14746 738 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 HSP90AA4PQ58FG1 418 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 RRAGBQ5VZM2 374 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 ARMCX5Q6P1M9 558 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 TMEM106CQ9BVX2 250 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 RABGAP1Q9Y3P9 1069 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 DNAH12Q6ZR08 3092 aa18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 ZNFX1Q9P2E3 1918 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 PP2D1A8MPX8 630 aa18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 PPP1R3GB7ZBB8 358 aa18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 TRIM32Q13049 653 aa18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 ORC2Q13416 577 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 GPR142Q7Z601 462 aa18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 PRPF38AQ8NAV1 312 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 RASSF8Q8NHQ8 419 aa18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 SLF1Q9BQI6 1058 aa18.55■□□□□ 0.56
CHMP1A-204ENST00000547687 TDP2O95551 362 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 SFPQP23246 707 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 PLS1Q14651 629 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 SPATA1Q5VX52 437 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 KLHL10Q6JEL2 608 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 VSTM4Q8IW00 320 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 PRIMPOLQ96LW4 560 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 AK8Q96MA6 479 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 SAMSN1Q9NSI8 373 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 INHAP05111 366 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 TRAF1Q13077 416 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 SMYD4Q8IYR2 804 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 SLAIN1Q8ND83 568 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 ANO3Q9BYT9 981 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 UNC93B1Q9H1C4 597 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 RMND1Q9NWS8 449 aa18.54■□□□□ 0.56
CHMP1A-204ENST00000547687 CCL5P13501 91 aa18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 HOXA13P31271 388 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 DSG3P32926 999 aa18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 AP3B2Q13367 1082 aa18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 TPD52L1Q16890 204 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 LBX2Q6XYB7 198 aa18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 POTEDQ86YR6 584 aa18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 GTF3C2Q8WUA4 911 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 RNF208Q9H0X6 261 aa18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 HOXC10Q9NYD6 342 aa18.53■□□□□ 0.56
CHMP1A-204ENST00000547687 CEP290O15078 2479 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 UQCRHLA0A096LP55 91 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 SLC37A4O43826 429 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 RPN1P04843 607 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 UQCRHP07919 91 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 MAPK4P31152 587 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 STX17P56962 302 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 IRF5Q13568 498 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 NAALADL2Q58DX5 795 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 PLEKHH3Q7Z736 793 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 TBC1D5Q92609 795 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 AGBL1Q96MI9 1066 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 INTS13Q9NVM9 706 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 ZNF536O15090 1300 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 SYNRGQ9UMZ2 1314 aa18.52■□□□□ 0.56
CHMP1A-204ENST00000547687 CCL14Q16627 93 aa18.52■□□□□ 0.55
CHMP1A-204ENST00000547687 PPP4R3AQ6IN85 833 aa18.52■□□□□ 0.55
CHMP1A-204ENST00000547687 CABP7Q86V35 215 aa18.52■□□□□ 0.55
CHMP1A-204ENST00000547687 PLIN2Q99541 437 aa18.52■□□□□ 0.55
CHMP1A-204ENST00000547687 MOV10L1Q9BXT6 1211 aaKnown RBP18.52■□□□□ 0.55
CHMP1A-204ENST00000547687 PPP1R9AQ9ULJ8 1098 aa18.52■□□□□ 0.55
CHMP1A-204ENST00000547687 NRDCO43847 1150 aa18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 CFBP00751 764 aa18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 ICAM1P05362 532 aa18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 TECP42680 631 aa18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 ZNF658Q5TYW1 1059 aaPredicted RBP18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 TRIB2Q92519 343 aa18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 NUDT12Q9BQG2 462 aa18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 MRPL11Q9Y3B7 192 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-204ENST00000547687 SPDYE3A6NKU9 549 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 PIK3CDO00329 1044 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 UBXN2AP68543 259 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 CCNA1P78396 465 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 CPXCR1Q8N123 301 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 PXYLP1Q8TE99 480 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 C16orf45Q96MC5 204 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 MTMR9Q96QG7 549 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 SPATC1LQ9H0A9 340 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 SLC38A10Q9HBR0 1119 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 CCPG1Q9ULG6 757 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 FOSP01100 380 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 MYL1P05976 194 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 TMEM132BQ14DG7 1078 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 CALCRLQ16602 461 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 MCTP2Q6DN12 878 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 CUEDC2Q9H467 287 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 KCND1Q9NSA2 647 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 KBTBD4Q9NVX7 518 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 CTNND2Q9UQB3 1225 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 ABCB11O95342 1321 aa18.5■□□□□ 0.55
CHMP1A-204ENST00000547687 ERCC3P19447 782 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 TXKP42681 527 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 USP11P51784 963 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 ARHGAP4P98171 946 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms