RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
TMEM258-208ENST00000545210 H3BRB1 525 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 KDM4AO75164 1064 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 SMIM10L2AP0DMW4 78 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 SMIM10L2BP0DMW5 78 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 UBA1P22314 1058 aaKnown RBP13.39□□□□□ -0.27
TMEM258-208ENST00000545210 HOXC8P31273 242 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 CTNNB1P35222 781 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 DLX2Q07687 328 aaPredicted RBP13.39□□□□□ -0.27
TMEM258-208ENST00000545210 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 KCNV1Q6PIU1 500 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 ZFP91Q96JP5 570 aaPredicted RBP13.39□□□□□ -0.27
TMEM258-208ENST00000545210 PDCD2LQ9BRP1 358 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
TMEM258-208ENST00000545210 TUT1Q9H6E5 874 aaKnown RBP13.39□□□□□ -0.27
TMEM258-208ENST00000545210 MUTYHQ9UIF7 546 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 CCDC171Q6TFL3 1326 aa13.39□□□□□ -0.27
TMEM258-208ENST00000545210 TECTAO75443 2155 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
TMEM258-208ENST00000545210 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 PARP1P09874 1014 aaKnown RBP13.38□□□□□ -0.27
TMEM258-208ENST00000545210 HOXA13P31271 388 aaPredicted RBP13.38□□□□□ -0.27
TMEM258-208ENST00000545210 PDE1AP54750 535 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 HYAL1Q12794 435 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 PGM5Q15124 567 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 SMAD2Q15796 467 aaKnown RBP13.38□□□□□ -0.27
TMEM258-208ENST00000545210 CTC1Q2NKJ3 1217 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 ANKRD45Q5TZF3 282 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 IQCA1Q86XH1 822 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 FIBCD1Q8N539 461 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 IL31RAQ8NI17 732 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
TMEM258-208ENST00000545210 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 PHOX2BQ99453 314 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 RNPEPQ9H4A4 650 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 BCAS3Q9H6U6 928 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 MLXIPQ9HAP2 919 aa13.38□□□□□ -0.27
TMEM258-208ENST00000545210 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
TMEM258-208ENST00000545210 ZNF213O14771 459 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 GRM6O15303 877 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 MBTPS2O43462 519 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 NCK2O43639 380 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 PPP1R11O60927 126 aaPredicted RBP13.37□□□□□ -0.27
TMEM258-208ENST00000545210 CSPG5O95196 566 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 LGALS2P05162 132 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 HERC4Q5GLZ8 1057 aaPredicted RBP13.37□□□□□ -0.27
TMEM258-208ENST00000545210 VSIG10LQ86VR7 867 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 RNF135Q8IUD6 432 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 ENAHQ8N8S7 591 aaPredicted RBP13.37□□□□□ -0.27
TMEM258-208ENST00000545210 ZSCAN10Q96SZ4 725 aaPredicted RBP13.37□□□□□ -0.27
TMEM258-208ENST00000545210 POP1Q99575 1024 aaKnown RBP13.37□□□□□ -0.27
TMEM258-208ENST00000545210 AMNQ9BXJ7 453 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 IGFLR1Q9H665 355 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 SETD4Q9NVD3 440 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 CFAP54Q96N23 3096 aa13.37□□□□□ -0.27
TMEM258-208ENST00000545210 TTC3P53804 2025 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 B4E1Z4 1266 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 C5orf67F2Z3F1 127 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 CAND2O75155 1236 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 LINC00271P0C7V0 271 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 TGFB3P10600 412 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 GTF2F1P35269 517 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMEM258-208ENST00000545210 BMPR1AP36894 532 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 GHRHRQ02643 423 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 CCDC178Q5BJE1 867 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 APBB2Q92870 758 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 SNX27Q96L92 541 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 C11orf84Q9BUA3 381 aaPredicted RBP13.36□□□□□ -0.27
TMEM258-208ENST00000545210 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
TMEM258-208ENST00000545210 NOP56O00567 594 aaKnown RBP13.35□□□□□ -0.27
TMEM258-208ENST00000545210 LINC01565O15544 149 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 TBX10O75333 385 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 RB1P06400 928 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 CCND2P30279 289 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 EDAQ92838 391 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 LMAN2LQ9H0V9 348 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 MAP3K20Q9NYL2 800 aaKnown RBP13.35□□□□□ -0.27
TMEM258-208ENST00000545210 ZSWIM5Q9P217 1185 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
TMEM258-208ENST00000545210 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 STXBP3O00186 592 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 ZBTB5O15062 677 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 GNAT1P11488 350 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
TMEM258-208ENST00000545210 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
TMEM258-208ENST00000545210 FAM26DQ5JW98 314 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 IER5LQ5T953 404 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 FCHSD1Q86WN1 690 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 TICAM2Q86XR7 235 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 TRIM50Q86XT4 487 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 PRSS33Q8NF86 280 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 RILPL2Q969X0 211 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 ALG13Q9NP73 1137 aaKnown RBP13.34□□□□□ -0.27
TMEM258-208ENST00000545210 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
TMEM258-208ENST00000545210 RWDD3Q9Y3V2 267 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms