RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 SMIM10L2BP0DMW5 78 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 HOXC8P31273 242 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 THPOP40225 353 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 KRT40Q6A162 431 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 CASC1Q6TDU7 716 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 ZNF654Q8IZM8 581 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 CUL5Q93034 780 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 ATP6V0A1Q93050 837 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 RAD9AQ99638 391 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 MYL10Q9BUA6 226 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 LY9Q9HBG7 655 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 SEC63Q9UGP8 760 aaKnown RBP16.3■□□□□ 0.2
DDX11-228ENST00000545115 COG5Q9UP83 839 aa16.3■□□□□ 0.2
DDX11-228ENST00000545115 LPXNO60711 386 aa16.29■□□□□ 0.2
DDX11-228ENST00000545115 BMP1P13497 986 aa16.29■□□□□ 0.2
DDX11-228ENST00000545115 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
DDX11-228ENST00000545115 CYFIP1Q7L576 1253 aa16.29■□□□□ 0.2
DDX11-228ENST00000545115 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
DDX11-228ENST00000545115 BCAS3Q9H6U6 928 aa16.29■□□□□ 0.2
DDX11-228ENST00000545115 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
DDX11-228ENST00000545115 COL4A4P53420 1690 aaPredicted RBP16.28■□□□□ 0.2
DDX11-228ENST00000545115 PIK3CDO00329 1044 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 PRC1O43663 620 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 CAND2O75155 1236 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 GNAQP50148 359 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 KCNQ1P51787 676 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
DDX11-228ENST00000545115 SEMA3FQ13275 785 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 XRRA1Q6P2D8 792 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 DBF4BQ8NFT6 615 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 GDPD5Q8WTR4 605 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 TGS1Q96RS0 853 aaKnown RBP16.28■□□□□ 0.2
DDX11-228ENST00000545115 GPR20Q99678 358 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 RNPEPQ9H4A4 650 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 LMCD1Q9NZU5 365 aa16.28■□□□□ 0.2
DDX11-228ENST00000545115 ZNF215Q9UL58 517 aaPredicted RBP16.28■□□□□ 0.2
DDX11-228ENST00000545115 LINC01553A4QN01 128 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 CCDC69A6NI79 296 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 MEIS2O14770 477 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 TREHO43280 583 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 AMHP03971 560 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 GNAT1P11488 350 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 MCM5P33992 734 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 ERVK-21P61565 698 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
DDX11-228ENST00000545115 PLEKHG4Q58EX7 1191 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 FAM117BQ6P1L5 589 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 NFXL1Q6ZNB6 911 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 HLA-CQ95604 372 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 TMEM87BQ96K49 555 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 SENP7Q9BQF6 1050 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 MTUS1Q9ULD2 1270 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 INSL6Q9Y581 213 aa16.27■□□□□ 0.2
DDX11-228ENST00000545115 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
DDX11-228ENST00000545115 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDX11-228ENST00000545115 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
DDX11-228ENST00000545115 TRIM50Q86XT4 487 aa16.26■□□□□ 0.19
DDX11-228ENST00000545115 MYOCDQ8IZQ8 938 aa16.26■□□□□ 0.19
DDX11-228ENST00000545115 SEPT8Q92599 483 aa16.26■□□□□ 0.19
DDX11-228ENST00000545115 NECAB3Q96P71 396 aaPredicted RBP16.26■□□□□ 0.19
DDX11-228ENST00000545115 SUGCTQ9HAC7 445 aa16.26■□□□□ 0.19
DDX11-228ENST00000545115 SETD4Q9NVD3 440 aa16.26■□□□□ 0.19
DDX11-228ENST00000545115 XIRP2A4UGR9 3374 aa16.26■□□□□ 0.19
DDX11-228ENST00000545115 PLEKHA8P1O95397 391 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 CTSHP09668 335 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 CALM1P0DP23 149 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 CALM2P0DP24 149 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 CALM3P0DP25 149 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 LIFRP42702 1097 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 SP4Q02446 784 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 UTP14CQ5TAP6 766 aaKnown RBP16.25■□□□□ 0.19
DDX11-228ENST00000545115 SRBD1Q8N5C6 995 aaKnown RBP16.25■□□□□ 0.19
DDX11-228ENST00000545115 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
DDX11-228ENST00000545115 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
DDX11-228ENST00000545115 NCOR1O75376 2440 aa16.25■□□□□ 0.19
DDX11-228ENST00000545115 TRANK1O15050 2925 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 RBAK-RBAKDNI3L0D1 243 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 SLC27A2O14975 620 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 HTRA4P83105 476 aaPredicted RBP16.24■□□□□ 0.19
DDX11-228ENST00000545115 GPRASP2Q96D09 838 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 SLC12A7Q9Y666 1083 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 MICAL3Q7RTP6 2002 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 SIP14410 1827 aa16.24■□□□□ 0.19
DDX11-228ENST00000545115 NRCAMQ92823 1304 aa16.23■□□□□ 0.19
DDX11-228ENST00000545115 RXRAP19793 462 aa16.23■□□□□ 0.19
DDX11-228ENST00000545115 COL9A1P20849 921 aa16.23■□□□□ 0.19
DDX11-228ENST00000545115 ADAM17P78536 824 aa16.23■□□□□ 0.19
DDX11-228ENST00000545115 ARHGAP4P98171 946 aa16.23■□□□□ 0.19
DDX11-228ENST00000545115 CMTR1Q8N1G2 835 aaKnown RBP16.23■□□□□ 0.19
DDX11-228ENST00000545115 FBXO22Q8NEZ5 403 aa16.23■□□□□ 0.19
DDX11-228ENST00000545115 SP7Q8TDD2 431 aaPredicted RBP16.23■□□□□ 0.19
DDX11-228ENST00000545115 LMBR1Q8WVP7 490 aa16.23■□□□□ 0.19
DDX11-228ENST00000545115 APBB2Q92870 758 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms