RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 SMIM10L2BP0DMW5 78 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 TGFB3P10600 412 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 HOXC8P31273 242 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 HSD17B4P51659 736 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 CLUL1Q15846 466 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 IQCA1Q86XH1 822 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 TICAM2Q86XR7 235 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 RNF135Q8IUD6 432 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 TBC1D10CQ8IV04 446 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 PDCD2LQ9BRP1 358 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 TUT1Q9H6E5 874 aaKnown RBP17■□□□□ 0.31
COPS7A-220ENST00000544725 MLXIPQ9HAP2 919 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 MAP3K20Q9NYL2 800 aaKnown RBP17■□□□□ 0.31
COPS7A-220ENST00000544725 MYO7AQ13402 2215 aa17■□□□□ 0.31
COPS7A-220ENST00000544725 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 SALL3Q9BXA9 1300 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 GNAT1P11488 350 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 UBA1P22314 1058 aaKnown RBP16.99■□□□□ 0.31
COPS7A-220ENST00000544725 GHRHRQ02643 423 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 HYAL1Q12794 435 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
COPS7A-220ENST00000544725 EDAQ92838 391 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 AMNQ9BXJ7 453 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 RNPEPQ9H4A4 650 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 JMJD4Q9H9V9 463 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 VAT1LQ9HCJ6 419 aa16.99■□□□□ 0.31
COPS7A-220ENST00000544725 NEDD4P46934 1319 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 PARP1P09874 1014 aaKnown RBP16.98■□□□□ 0.31
COPS7A-220ENST00000544725 BMPR1AP36894 532 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 PTPN5P54829 565 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 PKN1Q16512 942 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 BMP8AQ7Z5Y6 402 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
COPS7A-220ENST00000544725 VSIG10LQ86VR7 867 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 ANKS1AQ92625 1134 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 PRRX2Q99811 253 aa16.98■□□□□ 0.31
COPS7A-220ENST00000544725 USP34Q70CQ2 3546 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 STXBP3O00186 592 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 NOP56O00567 594 aaKnown RBP16.97■□□□□ 0.31
COPS7A-220ENST00000544725 GRM6O15303 877 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 LGALS2P05162 132 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 SP2Q02086 613 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 DLX2Q07687 328 aaPredicted RBP16.97■□□□□ 0.31
COPS7A-220ENST00000544725 PGM5Q15124 567 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 OSBPL7Q9BZF2 842 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 CD207Q9UJ71 328 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 RALGAPA2Q2PPJ7 1873 aa16.97■□□□□ 0.31
COPS7A-220ENST00000544725 ADGRA3Q8IWK6 1321 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 ZNF213O14771 459 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 OPLAHO14841 1288 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 ST18O60284 1047 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 CCND2P30279 289 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 MFAP1P55081 439 aaKnown RBP16.96■□□□□ 0.31
COPS7A-220ENST00000544725 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-220ENST00000544725 PRSS33Q8NF86 280 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 PPP2R3CQ969Q6 453 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 ZSCAN10Q96SZ4 725 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-220ENST00000544725 PHOX2BQ99453 314 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 USP26Q9BXU7 913 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 IGFLR1Q9H665 355 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 SETD4Q9NVD3 440 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 PCDHB15Q9Y5E8 787 aa16.96■□□□□ 0.31
COPS7A-220ENST00000544725 TECTAO75443 2155 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 NLRC5Q86WI3 1866 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 TMEM221A6NGB7 291 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 M0R296 226 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 KDM4AO75164 1064 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 TBX10O75333 385 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 MMP1P03956 469 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 LINC00271P0C7V0 271 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 FAM26DQ5JW98 314 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 TRIM67Q6ZTA4 783 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 SUGP1Q8IWZ8 645 aaKnown RBP16.95■□□□□ 0.3
COPS7A-220ENST00000544725 IL31RAQ8NI17 732 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 CLP1Q92989 425 aaKnown RBP16.95■□□□□ 0.3
COPS7A-220ENST00000544725 PBXIP1Q96AQ6 731 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 ZNF215Q9UL58 517 aaPredicted RBP16.95■□□□□ 0.3
COPS7A-220ENST00000544725 PCDHA1Q9Y5I3 950 aa16.95■□□□□ 0.3
COPS7A-220ENST00000544725 CFAP54Q96N23 3096 aa16.94■□□□□ 0.3
COPS7A-220ENST00000544725 HOXA13P31271 388 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-220ENST00000544725 NDUFV1P49821 464 aa16.94■□□□□ 0.3
COPS7A-220ENST00000544725 PDE1AP54750 535 aa16.94■□□□□ 0.3
COPS7A-220ENST00000544725 ADAM15Q13444 863 aa16.94■□□□□ 0.3
COPS7A-220ENST00000544725 GNPTABQ3T906 1256 aa16.94■□□□□ 0.3
COPS7A-220ENST00000544725 ENAHQ8N8S7 591 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-220ENST00000544725 GPKOWQ92917 476 aaPredicted RBP eCLIP16.94■□□□□ 0.3
COPS7A-220ENST00000544725 PLVAPQ9BX97 442 aa16.94■□□□□ 0.3
COPS7A-220ENST00000544725 GCOM1H8Y6P7 765 aaPredicted RBP16.93■□□□□ 0.3
COPS7A-220ENST00000544725 ZBTB5O15062 677 aa16.93■□□□□ 0.3
COPS7A-220ENST00000544725 POLR2MP0CAP2 368 aa16.93■□□□□ 0.3
COPS7A-220ENST00000544725 GTF2F1P35269 517 aaKnown RBP eCLIP16.93■□□□□ 0.3
COPS7A-220ENST00000544725 ARHGAP4P98171 946 aa16.93■□□□□ 0.3
COPS7A-220ENST00000544725 TRAF1Q13077 416 aa16.93■□□□□ 0.3
COPS7A-220ENST00000544725 BTG3Q14201 252 aaPredicted RBP16.93■□□□□ 0.3
COPS7A-220ENST00000544725 NEDD9Q14511 834 aa16.93■□□□□ 0.3
COPS7A-220ENST00000544725 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms