RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 NASPP49321 788 aaPredicted RBP14.82□□□□□ -0.04
DDX11-227ENST00000544652 PTPAQ15257 358 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 SF3A1Q15459 793 aaKnown RBP14.82□□□□□ -0.04
DDX11-227ENST00000544652 ANO1Q5XXA6 986 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 HAS1Q92839 578 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 SLC5A5Q92911 643 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 FAM20AQ96MK3 541 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 ZNF396Q96N95 335 aaPredicted RBP14.82□□□□□ -0.04
DDX11-227ENST00000544652 TMEM60Q9H2L4 133 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 FAM184BQ9ULE4 1060 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 GNEQ9Y223 722 aaKnown RBP14.82□□□□□ -0.04
DDX11-227ENST00000544652 Q9Y3F1 56 aa14.82□□□□□ -0.04
DDX11-227ENST00000544652 IPO5O00410 1097 aaKnown RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 BMP15O95972 392 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 TXNP10599 105 aaKnown RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 SMPD1P17405 629 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 UBA1P22314 1058 aaKnown RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 PRPHP41219 470 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 NKX3-2P78367 333 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 ATP2C1P98194 919 aaPredicted RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 TNFAIP2Q03169 654 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 PTGDRQ13258 359 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 ITGB3BPQ13352 177 aaPredicted RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 LY6KQ17RY6 165 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 TMEM63BQ5T3F8 832 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 GIMAP8Q8ND71 665 aaPredicted RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 EMID1Q96A84 441 aaPredicted RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 RIT2Q99578 217 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 ZNF577Q9BSK1 485 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 HMX1Q9NP08 348 aaPredicted RBP14.81□□□□□ -0.04
DDX11-227ENST00000544652 CLIC4Q9Y696 253 aa14.81□□□□□ -0.04
DDX11-227ENST00000544652 HTTP42858 3142 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 DUSP11O75319 330 aaKnown RBP14.8□□□□□ -0.04
DDX11-227ENST00000544652 PSMD10O75832 226 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 OR52Z1P0C646 297 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 DNM1Q05193 864 aaKnown RBP14.8□□□□□ -0.04
DDX11-227ENST00000544652 NEDD9Q14511 834 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 CALCRLQ16602 461 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 CELF3Q5SZQ8 465 aaKnown RBP14.8□□□□□ -0.04
DDX11-227ENST00000544652 B3GNT9Q6UX72 402 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 SLFN12Q8IYM2 578 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 ZNF333Q96JL9 665 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 FTOQ9C0B1 505 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX11-227ENST00000544652 PAK6Q9NQU5 681 aaPredicted RBP14.8□□□□□ -0.04
DDX11-227ENST00000544652 TBC1D22BQ9NU19 505 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 WDR70Q9NW82 654 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 CFAP45Q9UL16 551 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 CEP131Q9UPN4 1083 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 SCN10AQ9Y5Y9 1956 aa14.8□□□□□ -0.04
DDX11-227ENST00000544652 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 MSCO60682 206 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 FARP2O94887 1054 aaPredicted RBP14.79□□□□□ -0.04
DDX11-227ENST00000544652 BAG4O95429 457 aaKnown RBP14.79□□□□□ -0.04
DDX11-227ENST00000544652 YEATS4O95619 227 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 ARHGAP1Q07960 439 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 SLC39A14Q15043 492 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 ARL6IP4Q66PJ3 421 aaKnown RBP14.79□□□□□ -0.04
DDX11-227ENST00000544652 METTL7BQ6UX53 244 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 LINC00301Q8NCQ3 95 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 COPS5Q92905 334 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 MCOLN1Q9GZU1 580 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX11-227ENST00000544652 BCAS3Q9H6U6 928 aa14.79□□□□□ -0.04
DDX11-227ENST00000544652 TFIP11Q9UBB9 837 aaKnown RBP14.79□□□□□ -0.04
DDX11-227ENST00000544652 DDX20Q9UHI6 824 aaKnown RBP14.79□□□□□ -0.04
DDX11-227ENST00000544652 GGPS1O95749 300 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 GH1P01241 217 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 CNGA1P29973 690 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 KRT85P78386 507 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 SPIRE1Q08AE8 756 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 PPP2R5CQ13362 524 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 LAMC2Q13753 1193 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 MTFR1Q15390 333 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 GJC2Q5T442 439 aaPredicted RBP14.78□□□□□ -0.04
DDX11-227ENST00000544652 LRCH2Q5VUJ6 765 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 LHX8Q68G74 356 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 TNPO1Q92973 898 aaKnown RBP14.78□□□□□ -0.04
DDX11-227ENST00000544652 GJA10Q969M2 543 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 TEKT3Q9BXF9 490 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 UNC93B1Q9H1C4 597 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 UPF3AQ9H1J1 476 aaKnown RBP14.78□□□□□ -0.04
DDX11-227ENST00000544652 TTC12Q9H892 705 aaPredicted RBP14.78□□□□□ -0.04
DDX11-227ENST00000544652 RCOR1Q9UKL0 485 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 VAV3Q9UKW4 847 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 PCDHA12Q9UN75 941 aa14.78□□□□□ -0.04
DDX11-227ENST00000544652 TRIP12Q14669 1992 aaPredicted RBP14.77□□□□□ -0.04
DDX11-227ENST00000544652 CTAGE5O15320 804 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 GAS7O60861 476 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 PPP6R2O75170 966 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 ATG7O95352 703 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 RARBP10826 455 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 CCL5P13501 91 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 PTGS1P23219 599 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.05
DDX11-227ENST00000544652 GJA9P57773 515 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 KRT76Q01546 638 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 IL17AQ16552 155 aa14.77□□□□□ -0.05
DDX11-227ENST00000544652 FOXD4L6Q3SYB3 417 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms