RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SPATA33Q96N06 139 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 AMNQ9BXJ7 453 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 KAT14Q9H8E8 782 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 ZSWIM5Q9P217 1185 aa8.51□□□□□ -1.05
YBX3-209ENST00000540747 C17orf102A2RUQ5 167 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
YBX3-209ENST00000540747 H3BQ06 376 aaPredicted RBP8.5□□□□□ -1.05
YBX3-209ENST00000540747 H3BRB1 525 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 ZNF213O14771 459 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 ZBTB5O15062 677 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 TREHO43280 583 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 DCXO43602 365 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 LGALS2P05162 132 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 ALADP13716 330 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 ICAM3P32942 547 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 THPOP40225 353 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
YBX3-209ENST00000540747 MRPS9P82933 396 aaKnown RBP8.5□□□□□ -1.05
YBX3-209ENST00000540747 PTPROQ16827 1216 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 USP34Q70CQ2 3546 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 RPAINQ86UA6 219 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 SMC5Q8IY18 1101 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 TMEM192Q8IY95 271 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 BANK1Q8NDB2 785 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 SEPT8Q92599 483 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 INPP4AQ96PE3 977 aaPredicted RBP8.5□□□□□ -1.05
YBX3-209ENST00000540747 DSCC1Q9BVC3 393 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 RNPEPQ9H4A4 650 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 TUT1Q9H6E5 874 aaKnown RBP8.5□□□□□ -1.05
YBX3-209ENST00000540747 PRKAG3Q9UGI9 489 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 CTNNA3Q9UI47 895 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 MAD2L2Q9UI95 211 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 TELO2Q9Y4R8 837 aa8.5□□□□□ -1.05
YBX3-209ENST00000540747 RALGAPA2Q2PPJ7 1873 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 MYH7BA7E2Y1 1941 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 MYH6P13533 1939 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 KLRF2D3W0D1 207 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 SORBS3O60504 671 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 HOXA13P31271 388 aaPredicted RBP8.49□□□□□ -1.05
YBX3-209ENST00000540747 RRP1P56182 461 aaKnown RBP8.49□□□□□ -1.05
YBX3-209ENST00000540747 NHLH1Q02575 133 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 GPM6BQ13491 265 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 PLEKHM2Q8IWE5 1019 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 ADHFE1Q8IWW8 467 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 CLP1Q92989 425 aaKnown RBP8.49□□□□□ -1.05
YBX3-209ENST00000540747 ATP6V0A1Q93050 837 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 GPR20Q99678 358 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 KCNH6Q9H252 994 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 IL25Q9H293 177 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 NSUN3Q9H649 340 aaKnown RBP8.49□□□□□ -1.05
YBX3-209ENST00000540747 RIOX1Q9H6W3 641 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 EHMT1Q9H9B1 1298 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 VAT1LQ9HCJ6 419 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 PCDHA1Q9Y5I3 950 aa8.49□□□□□ -1.05
YBX3-209ENST00000540747 CFAP54Q96N23 3096 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 SPATA31C2B4DYI2 1134 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 CYTH3O43739 400 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 CTSHP09668 335 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 MYCLP12524 364 aaPredicted RBP8.48□□□□□ -1.05
YBX3-209ENST00000540747 CCND2P30279 289 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 SSTR3P32745 418 aaPredicted RBP8.48□□□□□ -1.05
YBX3-209ENST00000540747 IRS1P35568 1242 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 DLX2Q07687 328 aaPredicted RBP8.48□□□□□ -1.05
YBX3-209ENST00000540747 MGAT3Q09327 533 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 HYAL1Q12794 435 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 CAMK1Q14012 370 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 GRM4Q14833 912 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 SMAD2Q15796 467 aaKnown RBP8.48□□□□□ -1.05
YBX3-209ENST00000540747 METTL7BQ6UX53 244 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 CYB5R4Q7L1T6 521 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
YBX3-209ENST00000540747 TRIM50Q86XT4 487 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 CRIPAKQ8N1N5 446 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 LMBR1Q8WVP7 490 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 APBB2Q92870 758 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 ZFP91Q96JP5 570 aaPredicted RBP8.48□□□□□ -1.05
YBX3-209ENST00000540747 FBXL18Q96ME1 805 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 CRBNQ96SW2 442 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 YME1L1Q96TA2 773 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 USP26Q9BXU7 913 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 IFIH1Q9BYX4 1025 aaKnown RBP8.48□□□□□ -1.05
YBX3-209ENST00000540747 KRT23Q9C075 422 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 LNPKQ9C0E8 428 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 LMAN2LQ9H0V9 348 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 SETD4Q9NVD3 440 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 NLRC5Q86WI3 1866 aa8.48□□□□□ -1.05
YBX3-209ENST00000540747 TTC3P53804 2025 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 BAZ2BQ9UIF8 2168 aaKnown RBP8.47□□□□□ -1.05
YBX3-209ENST00000540747 MBLAC1A4D2B0 266 aaPredicted RBP8.47□□□□□ -1.05
YBX3-209ENST00000540747 TRIM6-TRIM34B2RNG4 842 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 GCOM1H8Y6P7 765 aaPredicted RBP8.47□□□□□ -1.05
YBX3-209ENST00000540747 GRM6O15303 877 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 NCK2O43639 380 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 DHX16O60231 1041 aaKnown RBP8.47□□□□□ -1.05
YBX3-209ENST00000540747 TBX10O75333 385 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 STAM2O75886 525 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 CHRNA1P02708 482 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 RB1P06400 928 aa8.47□□□□□ -1.05
YBX3-209ENST00000540747 POLR2MP0CAP2 368 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms