RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 COL15A1P39059 1388 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 EXOC3O60645 756 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 GCFC2P16383 781 aaKnown RBP14.18□□□□□ -0.14
DNMT1-203ENST00000540357 NTRK3Q16288 839 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 ADAT2Q7Z6V5 191 aaKnown RBP14.18□□□□□ -0.14
DNMT1-203ENST00000540357 CCDC13Q8IYE1 715 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 TRIM6Q9C030 488 aaPredicted RBP14.18□□□□□ -0.14
DNMT1-203ENST00000540357 GJC1P36383 396 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 ARHGAP44Q17R89 818 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 BBOF1Q8ND07 529 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 VTI1AQ96AJ9 217 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 LRRD1A4D1F6 860 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 RASGRF2O14827 1237 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 PLCB3Q01970 1234 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 PPP2R5AQ15172 486 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 CCDC62Q6P9F0 684 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 RBM12Q9NTZ6 932 aaKnown RBP14.18□□□□□ -0.14
DNMT1-203ENST00000540357 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 KIAA1024Q9UPX6 916 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 MAN1A1P33908 653 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 TRIM68Q6AZZ1 485 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 TXLNGQ9NUQ3 528 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 SUFUQ9UMX1 484 aa14.18□□□□□ -0.14
DNMT1-203ENST00000540357 CSF1RP07333 972 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 ELF1P32519 619 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 IL9RQ01113 521 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 TBC1D1Q86TI0 1168 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-203ENST00000540357 ERGIC2Q96RQ1 377 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 SEC31BQ9NQW1 1179 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 THAP12O43422 761 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 KRT15P19012 456 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 HERVK_113P62684 666 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 RBBP5Q15291 538 aaKnown RBP14.17□□□□□ -0.14
DNMT1-203ENST00000540357 AGBL2Q5U5Z8 902 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 ARHGEF18Q6ZSZ5 1173 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 UHMK1Q8TAS1 419 aaKnown RBP14.17□□□□□ -0.14
DNMT1-203ENST00000540357 ACSBG1Q96GR2 724 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 PPP1R12CQ9BZL4 782 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 PSTPIP2Q9H939 334 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 EVI5O60447 810 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 TROVE2P10155 538 aaKnown RBP eCLIP14.17□□□□□ -0.14
DNMT1-203ENST00000540357 SLC1A4P43007 532 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 PDE6CP51160 858 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 LIN9Q5TKA1 542 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 FOXR1Q6PIV2 292 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 PEX19P40855 299 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 STAG2Q8N3U4 1231 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 CAVIN3Q969G5 261 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 BICD1Q96G01 975 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 RNPC3Q96LT9 517 aaKnown RBP14.17□□□□□ -0.14
DNMT1-203ENST00000540357 C7orf25Q9BPX7 421 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 CARD10Q9BWT7 1032 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 EPB41L4AQ9HCS5 686 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-203ENST00000540357 ASAP1Q9ULH1 1129 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 DLG5Q8TDM6 1919 aa14.17□□□□□ -0.14
DNMT1-203ENST00000540357 RPS8P62241 208 aaKnown RBP14.16□□□□□ -0.14
DNMT1-203ENST00000540357 PLS1Q14651 629 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 DDB1Q16531 1140 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 TXNRD1Q16881 649 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 TRIM9Q9C026 710 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 KRT14P02533 472 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 FGGP02679 453 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 CDC37Q16543 378 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-203ENST00000540357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.16□□□□□ -0.14
DNMT1-203ENST00000540357 CYFIP2Q96F07 1278 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 ELAC2Q9BQ52 826 aaKnown RBP14.16□□□□□ -0.14
DNMT1-203ENST00000540357 MYO1FO00160 1098 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 PODXLO00592 558 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 ORC4O43929 436 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 FIGNQ5HY92 759 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 TMEM139Q8IV31 216 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 RAD54LQ92698 747 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 FBXL5Q9UKA1 691 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 PPP1R21Q6ZMI0 780 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 CALR3Q96L12 384 aaKnown RBP14.16□□□□□ -0.14
DNMT1-203ENST00000540357 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
DNMT1-203ENST00000540357 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 EIF6P56537 245 aaKnown RBP14.15□□□□□ -0.14
DNMT1-203ENST00000540357 COL9A3Q14050 684 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-203ENST00000540357 ASPRV1Q53RT3 343 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 TCHHQ07283 1943 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 ADCY8P40145 1251 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 SH3BGRP55822 239 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-203ENST00000540357 SRBD1Q8N5C6 995 aaKnown RBP14.15□□□□□ -0.14
DNMT1-203ENST00000540357 DDX17Q92841 729 aaKnown RBP14.15□□□□□ -0.14
DNMT1-203ENST00000540357 ZBTB1Q9Y2K1 713 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 XDHP47989 1333 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 KRT5P13647 590 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 SMTNP53814 917 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 TAF11Q15544 211 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 MS4A14Q96JA4 679 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 SLC40A1Q9NP59 571 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 FCER1AP12319 257 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 ATF2P15336 505 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 GRM4Q14833 912 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 BARHL2Q9NY43 387 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 GCNT4Q9P109 453 aa14.15□□□□□ -0.14
DNMT1-203ENST00000540357 RFC4P35249 363 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms