RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CLIC2O15247 247 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 TLR2O60603 784 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 EEF2P13639 858 aaKnown RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 KCNA1Q09470 495 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 SEPT2Q15019 361 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 GUF1Q8N442 669 aaKnown RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 RBM12Q9NTZ6 932 aaKnown RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 DDTLA6NHG4 134 aaPredicted RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 PRPF6O94906 941 aaKnown RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.017e-7■■■□□ 16.9
BNIP3-202ENST00000540159 FAM83BQ5T0W9 1011 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 KCTD16Q68DU8 428 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 EHBP1Q8NDI1 1231 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 SPATA4Q8NEY3 305 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 BAP1Q92560 729 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 SCAF8Q9UPN6 1271 aaKnown RBP15.09■□□□□ 0.01
BNIP3-202ENST00000540159 COL4A3BPQ9Y5P4 624 aa15.09■□□□□ 0.01
BNIP3-202ENST00000540159 ZBTB39O15060 712 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 EHHADHQ08426 723 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 ADAM9Q13443 819 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 SEPT12Q8IYM1 358 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 RETREG2Q8NC44 543 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 TRIM58Q8NG06 486 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 EXOC4Q96A65 974 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 DNAJC18Q9H819 358 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 STK17AQ9UEE5 414 aa15.08■□□□□ 0.01
BNIP3-202ENST00000540159 ZBTB5O15062 677 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 KLRC1P26715 233 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 GUCY2FP51841 1108 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 MRPL12P52815 198 aaKnown RBP15.08■□□□□ 0
BNIP3-202ENST00000540159 GABPAQ06546 454 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 CKAP4Q07065 602 aaKnown RBP15.08■□□□□ 0
BNIP3-202ENST00000540159 TUBB2AQ13885 445 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 ZYXQ15942 572 aaKnown RBP15.08■□□□□ 0
BNIP3-202ENST00000540159 TBC1D10BQ4KMP7 808 aaPredicted RBP15.08■□□□□ 0
BNIP3-202ENST00000540159 GJB7Q6PEY0 223 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 SLF2Q8IX21 1173 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 TUBB2BQ9BVA1 445 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 MAGEF1Q9HAY2 307 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 RIC8AQ9NPQ8 531 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 BMP2KQ9NSY1 1161 aaPredicted RBP15.08■□□□□ 0
BNIP3-202ENST00000540159 SMCHD1A6NHR9 2005 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 A0A087X0T9 212 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 PALMO75781 387 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 FAM228BP0C875 321 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 SLC9A1P19634 815 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 GOLGA6L1Q8N7Z2 621 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 PIGOQ8TEQ8 1089 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 JRKLQ9Y4A0 524 aa15.08■□□□□ 0
BNIP3-202ENST00000540159 GAKO14976 1311 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 ACTN2P35609 894 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 FKBP3Q00688 224 aaKnown RBP15.07■□□□□ 0
BNIP3-202ENST00000540159 PLS1Q14651 629 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 CDC37Q16543 378 aaPredicted RBP15.07■□□□□ 0
BNIP3-202ENST00000540159 WDR93Q6P2C0 686 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 PDXDC1Q6P996 788 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 SCFD1Q8WVM8 642 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 RGL1Q9NZL6 768 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 NOL4O94818 638 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 NR2F2P24468 414 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 KIAA0753Q2KHM9 967 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 CRY2Q49AN0 593 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 CCNI2Q6ZMN8 369 aaPredicted RBP15.07■□□□□ 0
BNIP3-202ENST00000540159 KLHL7Q8IXQ5 586 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 TBC1D22AQ8WUA7 517 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 ALS2CR12Q96Q35 445 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 ANO3Q9BYT9 981 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 EMILIN3Q9NT22 766 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 PKD2L1Q9P0L9 805 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 MYH7BA7E2Y1 1941 aa15.07■□□□□ 0
BNIP3-202ENST00000540159 PVALEFA0A1B0GWK0 134 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 SFMBT2Q5VUG0 894 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 CCDC84Q86UT8 332 aaPredicted RBP15.06■□□□□ 0
BNIP3-202ENST00000540159 TLR10Q9BXR5 811 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 HYOU1Q9Y4L1 999 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 BBOX1O75936 387 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 HLA-DOAP06340 250 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 MYBP10242 640 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 POLD1P28340 1107 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 NOP2P46087 812 aaKnown RBP15.06■□□□□ 0
BNIP3-202ENST00000540159 HGSNATQ68CP4 663 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 SLFN13Q68D06 897 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 MAEAQ7L5Y9 396 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 SH2D3CQ8N5H7 860 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 PCDHB13Q9Y5F0 798 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 GOLGA6BA6NDN3 693 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 CASP4P49662 377 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 KLHL30Q0D2K2 578 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 APOBEC3HQ6NTF7 200 aaKnown RBP15.06■□□□□ 0
BNIP3-202ENST00000540159 SFR1Q86XK3 245 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 TSEN2Q8NCE0 465 aaKnown RBP15.06■□□□□ 0
BNIP3-202ENST00000540159 FAM71BQ8TC56 605 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 SH2D3AQ9BRG2 576 aa15.06■□□□□ 0
BNIP3-202ENST00000540159 CDK5RAP2Q96SN8 1893 aa15.05■□□□□ 0
BNIP3-202ENST00000540159 ESYT2A0FGR8 921 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms