RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 KCNV1Q6PIU1 500 aa17.32■□□□□ 0.36
VAMP1-207ENST00000539047 KRBA2Q6ZNG9 492 aa17.32■□□□□ 0.36
VAMP1-207ENST00000539047 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
VAMP1-207ENST00000539047 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
VAMP1-207ENST00000539047 STK17AQ9UEE5 414 aa17.32■□□□□ 0.36
VAMP1-207ENST00000539047 DIS3Q9Y2L1 958 aaKnown RBP17.32■□□□□ 0.36
VAMP1-207ENST00000539047 PP2D1A8MPX8 630 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 TNPO2O14787 897 aaKnown RBP17.31■□□□□ 0.36
VAMP1-207ENST00000539047 PSMD10O75832 226 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 EDNRBP24530 442 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 CTCFP49711 727 aaPredicted RBP17.31■□□□□ 0.36
VAMP1-207ENST00000539047 FCGRTP55899 365 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 KRT76Q01546 638 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 KARSQ15046 597 aaKnown RBP17.31■□□□□ 0.36
VAMP1-207ENST00000539047 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
VAMP1-207ENST00000539047 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 PKD2L1Q9P0L9 805 aa17.31■□□□□ 0.36
VAMP1-207ENST00000539047 SYCE3A1L190 88 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 CHMP2AO43633 222 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 SLFN14P0C7P3 912 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 SFNP31947 248 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 JAK3P52333 1124 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 SASS6Q6UVJ0 657 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
VAMP1-207ENST00000539047 UIMC1Q96RL1 719 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 LRRC27Q9C0I9 530 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 SERTAD1Q9UHV2 236 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 VAV3Q9UKW4 847 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 SAMM50Q9Y512 469 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 DOCK5Q9H7D0 1870 aa17.3■□□□□ 0.36
VAMP1-207ENST00000539047 NFASCO94856 1347 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 DDX39AO00148 427 aaKnown RBP17.29■□□□□ 0.36
VAMP1-207ENST00000539047 SMC2O95347 1197 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 PLCG1P19174 1290 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 CDC25AP30304 524 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 ICAM3P32942 547 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 RGS2P41220 211 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 LBX1P52954 281 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 AMPD3Q01432 767 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 ZNF792Q3KQV3 632 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 SEPT14Q6ZU15 432 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 MIER3Q7Z3K6 550 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
VAMP1-207ENST00000539047 KCTD17Q8N5Z5 321 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 RDM1Q8NG50 284 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 GJA10Q969M2 543 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 ZIC5Q96T25 663 aa17.29■□□□□ 0.36
VAMP1-207ENST00000539047 ASTN1O14525 1302 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 CASP8AP2Q9UKL3 1982 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 SPATA31C2B4DYI2 1134 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 ACTN4O43707 911 aaKnown RBP17.28■□□□□ 0.36
VAMP1-207ENST00000539047 CCDC192P0DO97 292 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 TGFB3P10600 412 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 MUTP22033 750 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 MAP2K5Q13163 448 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 NEDD9Q14511 834 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 POSTNQ15063 836 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 ARMCX2Q7L311 632 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 OTOP1Q7RTM1 612 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 MORC4Q8TE76 937 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
VAMP1-207ENST00000539047 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
VAMP1-207ENST00000539047 SYNGAP1Q96PV0 1343 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 WDR64B1ANS9 1081 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 DKC1O60832 514 aaKnown RBP eCLIP17.27■□□□□ 0.36
VAMP1-207ENST00000539047 MYL1P05976 194 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 RPA1P27694 616 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 ZNF445P59923 1031 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 MAP2K1Q02750 393 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-207ENST00000539047 SPIRE1Q08AE8 756 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 EPHA7Q15375 998 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-207ENST00000539047 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-207ENST00000539047 APBA2Q99767 749 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 POLR3CQ9BUI4 534 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-207ENST00000539047 UNC45AQ9H3U1 944 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 R3HDMLQ9H3Y0 253 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 JPH1Q9HDC5 661 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-207ENST00000539047 PRDM10Q9NQV6 1147 aa17.27■□□□□ 0.36
VAMP1-207ENST00000539047 WDR81Q562E7 1941 aa17.27■□□□□ 0.35
VAMP1-207ENST00000539047 A0A087X0B3 334 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 COBLO75128 1261 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 HSPA8P11142 646 aaKnown RBP17.26■□□□□ 0.35
VAMP1-207ENST00000539047 ITGB3BPQ13352 177 aaPredicted RBP17.26■□□□□ 0.35
VAMP1-207ENST00000539047 TTLL4Q14679 1199 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 E2F4Q16254 413 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 TMEM119Q4V9L6 283 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 HYIQ5T013 277 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 MORN1Q5T089 497 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 LRSAM1Q6UWE0 723 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 RBM43Q6ZSC3 357 aaKnown RBP17.26■□□□□ 0.35
VAMP1-207ENST00000539047 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 SMARCE1Q969G3 411 aa17.26■□□□□ 0.35
VAMP1-207ENST00000539047 MAML3Q96JK9 1138 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms