RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CYP3A7P24462 503 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 ATN1P54259 1190 aaPredicted RBP14.89□□□□□ -0.03
CHFR-216ENST00000538235 SNX17Q15036 470 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 NIPA1Q7RTP0 329 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 NEK8Q86SG6 692 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 GPR20Q99678 358 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 SENP6Q9GZR1 1112 aaPredicted RBP14.89□□□□□ -0.03
CHFR-216ENST00000538235 TMEM60Q9H2L4 133 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 EHMT1Q9H9B1 1298 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 TCHHQ07283 1943 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 LOXHD1Q8IVV2 1947 aa14.89□□□□□ -0.03
CHFR-216ENST00000538235 CCDC194A0A1B0GVG4 234 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 DDX39AO00148 427 aaKnown RBP14.88□□□□□ -0.03
CHFR-216ENST00000538235 XBP1P17861 261 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 U2AF2P26368 475 aaKnown RBP eCLIP14.88□□□□□ -0.034e-10■■■■■ 46.9
CHFR-216ENST00000538235 LETM2Q2VYF4 491 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 GNPTABQ3T906 1256 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 METTL7BQ6UX53 244 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 B3GNT9Q6UX72 402 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 RNF180Q86T96 592 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 NLRX1Q86UT6 975 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 HSCBQ8IWL3 235 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 DHX37Q8IY37 1157 aaKnown RBP14.88□□□□□ -0.03
CHFR-216ENST00000538235 PPTC7Q8NI37 304 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 HAS1Q92839 578 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 INTS4Q96HW7 963 aaKnown RBP14.88□□□□□ -0.03
CHFR-216ENST00000538235 CTAGE1Q96RT6 745 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 SENP7Q9BQF6 1050 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 C16orf70Q9BSU1 422 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 KAT6AQ92794 2004 aa14.88□□□□□ -0.03
CHFR-216ENST00000538235 CEP290O15078 2479 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 KBTBD13C9JR72 458 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 MYL3P08590 195 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 TGFB3P10600 412 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 SYT1P21579 422 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 USP11P51784 963 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 Q4G0T1 1027 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 NECAB2Q7Z6G3 386 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 NOSTRINQ8IVI9 506 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 ARRDC4Q8NCT1 418 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 SLC5A5Q92911 643 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 SPATA33Q96N06 139 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 TSEN34Q9BSV6 310 aaKnown RBP14.87□□□□□ -0.03
CHFR-216ENST00000538235 AP5M1Q9H0R1 490 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 FOXP1Q9H334 677 aaPredicted RBP14.87□□□□□ -0.03
CHFR-216ENST00000538235 KCNMB3Q9NPA1 279 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
CHFR-216ENST00000538235 NFASCO94856 1347 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 EVPLQ92817 2033 aa14.87□□□□□ -0.03
CHFR-216ENST00000538235 HAS3O00219 553 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 F2P00734 622 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 LGALS2P05162 132 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 ZNF76P36508 570 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 SPIRE1Q08AE8 756 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 RESTQ13127 1097 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 TRIM29Q14134 588 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 TRIM60Q495X7 471 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 MCTP2Q6DN12 878 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 FAM173BQ6P4H8 233 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 MOXD1Q6UVY6 613 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 SLC39A5Q6ZMH5 540 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 FERMT3Q86UX7 667 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 SLC43A3Q8NBI5 491 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 VAV3Q9UKW4 847 aa14.86□□□□□ -0.03
CHFR-216ENST00000538235 MOXD2PA6NHM9 499 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 IPO5O00410 1097 aaKnown RBP14.85□□□□□ -0.03
CHFR-216ENST00000538235 CCNT1O60563 726 aaKnown RBP14.85□□□□□ -0.03
CHFR-216ENST00000538235 PSMD10O75832 226 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 ATP2B1P20020 1258 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 CDK7P50613 346 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 RTP1P59025 263 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 ACTR2P61160 394 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 LAMC2Q13753 1193 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 UGCGQ16739 394 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
CHFR-216ENST00000538235 KCNV1Q6PIU1 500 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 CCDC60Q8IWA6 550 aaPredicted RBP14.85□□□□□ -0.03
CHFR-216ENST00000538235 C4orf32Q8N8J7 132 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 ZNF577Q9BSK1 485 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHFR-216ENST00000538235 UNC45AQ9H3U1 944 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 MLXIPQ9HAP2 919 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 JPH1Q9HDC5 661 aaPredicted RBP14.85□□□□□ -0.03
CHFR-216ENST00000538235 DDX25Q9UHL0 483 aaKnown RBP14.85□□□□□ -0.03
CHFR-216ENST00000538235 PCDHB6Q9Y5E3 794 aa14.85□□□□□ -0.03
CHFR-216ENST00000538235 PTPRSQ13332 1948 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 VPS37CA5D8V6 355 aaPredicted RBP14.84□□□□□ -0.03
CHFR-216ENST00000538235 EML1O00423 815 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 ATP4AP20648 1035 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 TCF7P36402 384 aaPredicted RBP14.84□□□□□ -0.03
CHFR-216ENST00000538235 CPT1AP50416 773 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 SETQ01105 290 aaPredicted RBP14.84□□□□□ -0.03
CHFR-216ENST00000538235 NEDD9Q14511 834 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 PPP4R3AQ6IN85 833 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 SH3RF1Q7Z6J0 888 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 WNT8BQ93098 351 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 ZBTB10Q96DT7 871 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 CHAMP1Q96JM3 812 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms