RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 ASH2LQ9UBL3 628 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 TEX51A0A1B0GUA7 166 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 GSG1L2A8MUP6 293 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 PDE8AO60658 829 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 MAFKO60675 156 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 KPNA6O60684 536 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 POU3F2P20265 443 aaPredicted RBP9.17□□□□□ -0.94
CASP4-213ENST00000534356 NEK4P51957 841 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 MESP2Q0VG99 397 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 PCBP1Q15365 356 aaKnown RBP eCLIP9.17□□□□□ -0.94
CASP4-213ENST00000534356 TMEM132EQ6IEE7 984 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 PTRH1Q86Y79 214 aaKnown RBP9.17□□□□□ -0.94
CASP4-213ENST00000534356 ARRDC4Q8NCT1 418 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 PANK1Q8TE04 598 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 WNK4Q96J92 1243 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 TELO2Q9Y4R8 837 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 RNF114Q9Y508 228 aa9.17□□□□□ -0.94
CASP4-213ENST00000534356 KCNK3O14649 394 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 LTFP02788 710 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 FBLN1P23142 703 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 PMLP29590 882 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 CDR1P51861 262 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 NCKAP1LP55160 1127 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 LDHDQ86WU2 507 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 THNSL2Q86YJ6 484 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 PHOSPHO1Q8TCT1 267 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 CLEC4DQ8WXI8 215 aa9.16□□□□□ -0.94
CASP4-213ENST00000534356 IRS2Q9Y4H2 1338 aa9.15□□□□□ -0.94
CASP4-213ENST00000534356 TRAF5O00463 557 aa9.15□□□□□ -0.94
CASP4-213ENST00000534356 MAN2B1O00754 1011 aa9.15□□□□□ -0.94
CASP4-213ENST00000534356 ASGR2P07307 311 aa9.15□□□□□ -0.94
CASP4-213ENST00000534356 MECP2P51608 486 aaKnown RBP9.15□□□□□ -0.94
CASP4-213ENST00000534356 TUSC3Q13454 348 aa9.15□□□□□ -0.94
CASP4-213ENST00000534356 GCM1Q9NP62 436 aa9.15□□□□□ -0.94
CASP4-213ENST00000534356 SRPK3Q9UPE1 567 aa9.15□□□□□ -0.94
CASP4-213ENST00000534356 CBX4O00257 560 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 EPHB3P54753 998 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 KCTD1Q719H9 257 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 AMIGO3Q86WK7 504 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 MIB1Q86YT6 1006 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 PPM1KQ8N3J5 372 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 C2orf69Q8N8R5 385 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 KCNN1Q92952 543 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 PRKAB1Q9Y478 270 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 NUB1Q9Y5A7 615 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 PCDHA5Q9Y5H7 936 aa9.14□□□□□ -0.95
CASP4-213ENST00000534356 SEMA7AO75326 666 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 EPHA5P54756 1037 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 GRIN1Q05586 938 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 FSTL4Q6MZW2 842 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 PKN3Q6P5Z2 889 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.13□□□□□ -0.95
CASP4-213ENST00000534356 TRIM48Q8IWZ4 208 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 AHI1Q8N157 1196 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 CHST14Q8NCH0 376 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 MAPRE3Q9UPY8 281 aa9.13□□□□□ -0.95
CASP4-213ENST00000534356 PAX4O43316 350 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 NCAM1P13591 858 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 ATF2P15336 505 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 CANXP27824 592 aaKnown RBP9.12□□□□□ -0.95
CASP4-213ENST00000534356 MC3RP41968 323 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 DLG4P78352 724 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 SEPT7Q16181 437 aaKnown RBP9.12□□□□□ -0.95
CASP4-213ENST00000534356 OGFOD2Q6N063 350 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 ETV3LQ6ZN32 361 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 SYDE1Q6ZW31 735 aaPredicted RBP9.12□□□□□ -0.95
CASP4-213ENST00000534356 RNF180Q86T96 592 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 ANKLE2Q86XL3 938 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 IGDCC3Q8IVU1 814 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 FAM126BQ8IXS8 530 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 NLGN4XQ8N0W4 816 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 UBR7Q8N806 425 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 LEO1Q8WVC0 666 aaPredicted RBP9.12□□□□□ -0.95
CASP4-213ENST00000534356 ORAI3Q9BRQ5 295 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 ATP23Q9Y6H3 246 aa9.12□□□□□ -0.95
CASP4-213ENST00000534356 ETV2O00321 342 aaPredicted RBP9.11□□□□□ -0.95
CASP4-213ENST00000534356 FARP2O94887 1054 aaPredicted RBP9.11□□□□□ -0.95
CASP4-213ENST00000534356 STAT3P40763 770 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 STAT5AP42229 794 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 SKOR2Q2VWA4 1001 aaPredicted RBP9.11□□□□□ -0.95
CASP4-213ENST00000534356 FIGNQ5HY92 759 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 EP400NLQ6ZTU2 488 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 OTOP1Q7RTM1 612 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 FILIP1Q7Z7B0 1213 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 NOSTRINQ8IVI9 506 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 FAM26EQ8N5C1 309 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 CPA5Q8WXQ8 436 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 FAM84AQ96KN4 292 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 PDGFDQ9GZP0 370 aaPredicted RBP9.11□□□□□ -0.95
CASP4-213ENST00000534356 RNF38Q9H0F5 515 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 B4GALT6Q9UBX8 382 aa9.11□□□□□ -0.95
CASP4-213ENST00000534356 SLC12A8A0AV02 714 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 PTPDC1A2A3K4 754 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 FAM90A27PA6NNH2 459 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 N4BP3O15049 544 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 VIL1P09327 827 aaKnown RBP9.1□□□□□ -0.95
CASP4-213ENST00000534356 ZBTB48P10074 688 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms