RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CHMP4BP1P59074 171 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 NEDD9Q14511 834 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 HIC1Q14526 733 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 KIAA0753Q2KHM9 967 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 PPP1R18Q6NYC8 613 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 TIFAQ96CG3 184 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 ASB2Q96Q27 587 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 SENP7Q9BQF6 1050 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 MLXIPQ9HAP2 919 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 V9GY48 417 aaPredicted RBP16.15■□□□□ 0.18
SF3B2-215ENST00000534307 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
SF3B2-215ENST00000534307 MUC6Q6W4X9 2439 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 hCG_1984214I3L0E3 225 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 STXBP3O00186 592 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 PFKMP08237 780 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 ITGB5P18084 799 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 HOXC8P31273 242 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 RFC2P35250 354 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 ADD1P35611 737 aaKnown RBP16.14■□□□□ 0.17
SF3B2-215ENST00000534307 APOBRQ0VD83 1088 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 BFSP2Q13515 415 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 ERICH6BQ5W0A0 696 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 Q6ZUG5 572 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 OTOP2Q7RTS6 562 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
SF3B2-215ENST00000534307 ZNF713Q8N859 430 aaPredicted RBP16.14■□□□□ 0.17
SF3B2-215ENST00000534307 C7orf31Q8N865 590 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 PPM1EQ8WY54 764 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 BRF1Q92994 677 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 GPRASP2Q96D09 838 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 UHRF1Q96T88 793 aaPredicted RBP16.14■□□□□ 0.17
SF3B2-215ENST00000534307 GPR20Q99678 358 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 PBX4Q9BYU1 374 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 RIC8AQ9NPQ8 531 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 PCDHA6Q9UN73 950 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 PCDHA8Q9Y5H6 950 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 UBIAD1Q9Y5Z9 338 aa16.14■□□□□ 0.17
SF3B2-215ENST00000534307 TET1Q8NFU7 2136 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 LGALS2P05162 132 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 KCNA2P16389 499 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 PBX2P40425 430 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
SF3B2-215ENST00000534307 EVCP57679 992 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 GPNMBQ14956 572 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 CYFIP1Q7L576 1253 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 ALG1Q9BT22 464 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
SF3B2-215ENST00000534307 PRDM12Q9H4Q4 367 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 PPP4R2Q9NY27 417 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 BARHL2Q9NY43 387 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 NOD1Q9Y239 953 aa16.13■□□□□ 0.17
SF3B2-215ENST00000534307 SPDYE3A6NKU9 549 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 H3BRB1 525 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 ATP9AO75110 1047 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 CLK2P49760 499 aaKnown RBP16.12■□□□□ 0.17
SF3B2-215ENST00000534307 NAPAP54920 295 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 ZNF200P98182 395 aaPredicted RBP16.12■□□□□ 0.17
SF3B2-215ENST00000534307 PTK7Q13308 1070 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 ADGRE1Q14246 886 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
SF3B2-215ENST00000534307 TRAF7Q6Q0C0 670 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 DEFB128Q7Z7B8 93 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 NLRX1Q86UT6 975 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 AFAP1L1Q8TED9 768 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 WNT8BQ93098 351 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 GAS2L1Q99501 681 aaPredicted RBP16.12■□□□□ 0.17
SF3B2-215ENST00000534307 USP26Q9BXU7 913 aa16.12■□□□□ 0.17
SF3B2-215ENST00000534307 TUT1Q9H6E5 874 aaKnown RBP16.12■□□□□ 0.17
SF3B2-215ENST00000534307 PRRC2BQ5JSZ5 2229 aaKnown RBP16.12■□□□□ 0.17
SF3B2-215ENST00000534307 CCDC196A0A1B0GTZ2 297 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 CKBP12277 381 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 PSMA5P28066 241 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 FGD1P98174 961 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 PFKFB3Q16875 520 aaPredicted RBP16.11■□□□□ 0.17
SF3B2-215ENST00000534307 CCDC155Q8N6L0 562 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 CDHR1Q96JP9 859 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 ZSWIM6Q9HCJ5 1215 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 BRWD1Q9NSI6 2320 aa16.11■□□□□ 0.17
SF3B2-215ENST00000534307 NOP56O00567 594 aaKnown RBP16.1■□□□□ 0.17
SF3B2-215ENST00000534307 SCG2P13521 617 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 SELPP16109 830 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 ADCY7P51828 1080 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 MRPS5P82675 430 aaKnown RBP16.1■□□□□ 0.17
SF3B2-215ENST00000534307 MTMR1Q13613 665 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 NTRK3Q16288 839 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 PKN1Q16512 942 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 LRRC8DQ7L1W4 858 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 SERINC5Q86VE9 423 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 TRIM50Q86XT4 487 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
SF3B2-215ENST00000534307 SLC4A7Q9Y6M7 1214 aa16.1■□□□□ 0.17
SF3B2-215ENST00000534307 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 SMCO2A6NFE2 343 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 MAFGO15525 162 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 FOSP01100 380 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms