RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 ALADP13716 330 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 MRE11P49959 708 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 HSDL1Q3SXM5 330 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 TCEAL5Q5H9L2 206 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 EP400NLQ6ZTU2 488 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 SERINC5Q86VE9 423 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 VSIG10LQ86VR7 867 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 SEPT8Q92599 483 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 PCDHA1Q9Y5I3 950 aa16.61■□□□□ 0.25
SHARPIN-208ENST00000533948 C5orf42Q9H799 3197 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 KLRF2D3W0D1 207 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 H3BRB1 525 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 OPLAHO14841 1288 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 ZBTB5O15062 677 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 CSPP1Q1MSJ5 1256 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 IFIT1BQ5T764 474 aaKnown RBP16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 BANK1Q8NDB2 785 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 YME1L1Q96TA2 773 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 TUT1Q9H6E5 874 aaKnown RBP16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 CNNM2Q9H8M5 875 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 NLRC5Q86WI3 1866 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 ATG2AQ2TAZ0 1938 aa16.6■□□□□ 0.25
SHARPIN-208ENST00000533948 GCOM1H8Y6P7 765 aaPredicted RBP16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 DCXO43602 365 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 UPP2O95045 317 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 CTSHP09668 335 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 POLR2MP0CAP2 368 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 GNAT1P11488 350 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 CCND2P30279 289 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 SP2Q02086 613 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 NHLH1Q02575 133 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 GHRHRQ02643 423 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 ZP2Q05996 745 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 GPM6BQ13491 265 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 PGM5Q15124 567 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 TIGD5Q53EQ6 642 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 STAG2Q8N3U4 1231 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 IL31RAQ8NI17 732 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 GPKOWQ92917 476 aaPredicted RBP eCLIP16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 TOP1MTQ969P6 601 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 FBXL18Q96ME1 805 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 C16orf70Q9BSU1 422 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 FAM50BQ9Y247 325 aa16.59■□□□□ 0.25
SHARPIN-208ENST00000533948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 POTEB3A0JP26 581 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 H3BNC9 293 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 NOP56O00567 594 aaKnown RBP16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 CAND2O75155 1236 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 CHMLP26374 656 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 HOXA13P31271 388 aaPredicted RBP16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 POTEBQ6S5H4 581 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 TMEM192Q8IY95 271 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 PABPC5Q96DU9 382 aaKnown RBP16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 USP26Q9BXU7 913 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 RNPEPQ9H4A4 650 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 BCAS3Q9H6U6 928 aa16.58■□□□□ 0.24
SHARPIN-208ENST00000533948 ZNF318Q5VUA4 2279 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 TREHO43280 583 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 SMIM10L2AP0DMW4 78 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 SMIM10L2BP0DMW5 78 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 UBA1P22314 1058 aaKnown RBP16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 NEDD9Q14511 834 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 GNPTABQ3T906 1256 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 FCHSD1Q86WN1 690 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 NSUN3Q9H649 340 aaKnown RBP16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 CLDND1Q9NY35 253 aa16.57■□□□□ 0.24
SHARPIN-208ENST00000533948 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 NCK2O43639 380 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 PPP1R11O60927 126 aaPredicted RBP16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 LGALS2P05162 132 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 PTH1RQ03431 593 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 COL19A1Q14993 1142 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 CLUL1Q15846 466 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 HFE2Q6ZVN8 426 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 RPAINQ86UA6 219 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 APBB2Q92870 758 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 MAD2L2Q9UI95 211 aa16.56■□□□□ 0.24
SHARPIN-208ENST00000533948 PALM3A6NDB9 673 aaPredicted RBP16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 STAM2O75886 525 aa16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 CSPG5O95196 566 aa16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 HOXC8P31273 242 aa16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 IRS1P35568 1242 aa16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 LTBRP36941 435 aa16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 TRDNQ13061 729 aa16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 IFIH1Q9BYX4 1025 aaKnown RBP16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 COL4A6Q14031 1691 aa16.55■□□□□ 0.24
SHARPIN-208ENST00000533948 RALGAPA2Q2PPJ7 1873 aa16.54■□□□□ 0.24
SHARPIN-208ENST00000533948 TRIOO75962 3097 aa16.54■□□□□ 0.24
SHARPIN-208ENST00000533948 CYFIP1Q7L576 1253 aa16.54■□□□□ 0.24
SHARPIN-208ENST00000533948 ADHFE1Q8IWW8 467 aa16.54■□□□□ 0.24
SHARPIN-208ENST00000533948 FIBCD1Q8N539 461 aa16.54■□□□□ 0.24
SHARPIN-208ENST00000533948 IL17RAQ96F46 866 aa16.54■□□□□ 0.24
SHARPIN-208ENST00000533948 UPF3BQ9BZI7 483 aaKnown RBP16.54■□□□□ 0.24
SHARPIN-208ENST00000533948 SETD4Q9NVD3 440 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms