RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 SFNP31947 248 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 TXKP42681 527 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 DNM1Q05193 864 aaKnown RBP23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 TRIM32Q13049 653 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 FAM173BQ6P4H8 233 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 SMAP1Q8IYB5 467 aaPredicted RBP23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 TRPV1Q8NER1 839 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 RDM1Q8NG50 284 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 USP28Q96RU2 1077 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.83■■□□□ 1.414e-8■■■■■ 32.9
PTP4A2-215ENST00000533408 TFIP11Q9UBB9 837 aaKnown RBP23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 SLC9A2Q9UBY0 812 aa23.83■■□□□ 1.41
PTP4A2-215ENST00000533408 MYH7BA7E2Y1 1941 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 ZEB2O60315 1214 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 KPNA6O60684 536 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 CCND3P30281 292 aaPredicted RBP23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 CPT1AP50416 773 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 SEMA3FQ13275 785 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 PDIA5Q14554 519 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 ZNF746Q6NUN9 644 aaPredicted RBP23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 ARRDC4Q8NCT1 418 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 MCOLN1Q9GZU1 580 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 RNF208Q9H0X6 261 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 TTC12Q9H892 705 aaPredicted RBP23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 GNEQ9Y223 722 aaKnown RBP23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 CLIC4Q9Y696 253 aa23.82■■□□□ 1.4
PTP4A2-215ENST00000533408 ATP9AO75110 1047 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 PPP6R2O75170 966 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 PSMD10O75832 226 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 CCL5P13501 91 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 JAK3P52333 1124 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 CEBPZQ03701 1054 aaKnown RBP23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 NBR1Q14596 966 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 FOXD4L6Q3SYB3 417 aaPredicted RBP23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 FOXD4L3Q6VB84 417 aaPredicted RBP23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 CYFIP1Q7L576 1253 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 C4orf32Q8N8J7 132 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 OR6J1Q8NGC5 347 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 HAS1Q92839 578 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 ZNF333Q96JL9 665 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 SPATA33Q96N06 139 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 TMEM106CQ9BVX2 250 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 PKD2L1Q9P0L9 805 aa23.81■■□□□ 1.4
PTP4A2-215ENST00000533408 SPTLC2O15270 562 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 DYNC1LI2O43237 492 aaPredicted RBP23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 ARIH2O95376 493 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 FXR2P51116 673 aaKnown RBP eCLIP23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 SP2Q02086 613 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 PPP2R5CQ13362 524 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 TLK2Q86UE8 772 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 LINC00301Q8NCQ3 95 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 PPTC7Q8NI37 304 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 ERMNQ8TAM6 284 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 SEPT1Q8WYJ6 367 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 SPATA32Q96LK8 384 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 XPNPEP3Q9NQH7 507 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 RCOR1Q9UKL0 485 aa23.8■■□□□ 1.4
PTP4A2-215ENST00000533408 WDR64B1ANS9 1081 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 WNT7AO00755 349 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 DHX15O43143 795 aaKnown RBP23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 PPFIA4O75335 1185 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 FARP2O94887 1054 aaPredicted RBP23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 GJA9P57773 515 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 ITGB3BPQ13352 177 aaPredicted RBP23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 PTPAQ15257 358 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 MIS18BP1Q6P0N0 1132 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 RNF180Q86T96 592 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 PCSK9Q8NBP7 692 aaKnown RBP23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 AK8Q96MA6 479 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 TMEM60Q9H2L4 133 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 PAK6Q9NQU5 681 aaPredicted RBP23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 ELP1O95163 1332 aa23.79■■□□□ 1.4
PTP4A2-215ENST00000533408 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 DKC1O60832 514 aaKnown RBP eCLIP23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 PSAPP07602 524 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 LONP1P36776 959 aaKnown RBP23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 NKX3-2P78367 333 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 ARHGAP1Q07960 439 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 DGKDQ16760 1214 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 KRI1Q8N9T8 703 aaKnown RBP23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 TNPO1Q92973 898 aaKnown RBP23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 GBP4Q96PP9 640 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 UNC93B1Q9H1C4 597 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 UPF3AQ9H1J1 476 aaKnown RBP23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 SAMM50Q9Y512 469 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 PCDHA10Q9Y5I2 948 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 SRPRBQ9Y5M8 271 aaKnown RBP23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 LRRC37A2A6NM11 1700 aa23.78■■□□□ 1.4
PTP4A2-215ENST00000533408 PCNTO95613 3336 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 KIAA1217Q5T5P2 1943 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 A6NJR5 290 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 GJB1P08034 283 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 TECP42680 631 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 MIER3Q7Z3K6 550 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 AZI2Q9H6S1 392 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 LRWD1Q9UFC0 647 aa23.77■■□□□ 1.4
PTP4A2-215ENST00000533408 SLC26A4O43511 780 aa23.76■■□□□ 1.39
PTP4A2-215ENST00000533408 C6orf222P0C671 652 aaPredicted RBP23.76■■□□□ 1.39
PTP4A2-215ENST00000533408 ME1P48163 572 aa23.76■■□□□ 1.39
PTP4A2-215ENST00000533408 ACTR2P61160 394 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms