RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 VAT1LQ9HCJ6 419 aa12.44□□□□□ -0.42
CTNND1-235ENST00000533189 RWDD3Q9Y3V2 267 aa12.44□□□□□ -0.42
CTNND1-235ENST00000533189 A0A0D9SFI3 127 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-235ENST00000533189 H3BRB1 525 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 TREHO43280 583 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 SMIM10L2AP0DMW4 78 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 SMIM10L2BP0DMW5 78 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 GNAT1P11488 350 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 LTBRP36941 435 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 CTC1Q2NKJ3 1217 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 RNF135Q8IUD6 432 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 TBC1D10CQ8IV04 446 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 PDCD2LQ9BRP1 358 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 C16orf70Q9BSU1 422 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 TUT1Q9H6E5 874 aaKnown RBP12.43□□□□□ -0.42
CTNND1-235ENST00000533189 ZDBF2Q9HCK1 2354 aa12.43□□□□□ -0.42
CTNND1-235ENST00000533189 LAMA4Q16363 1823 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 STXBP3O00186 592 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 NOP56O00567 594 aaKnown RBP12.42□□□□□ -0.42
CTNND1-235ENST00000533189 PARP1P09874 1014 aaKnown RBP12.42□□□□□ -0.42
CTNND1-235ENST00000533189 TGFB3P10600 412 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 UBA1P22314 1058 aaKnown RBP12.42□□□□□ -0.42
CTNND1-235ENST00000533189 BMPR1AP36894 532 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 HSD17B4P51659 736 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 PTPN5P54829 565 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 HYAL1Q12794 435 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
CTNND1-235ENST00000533189 ZNF589Q86UQ0 364 aaPredicted RBP12.42□□□□□ -0.42
CTNND1-235ENST00000533189 EDAQ92838 391 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 RNPEPQ9H4A4 650 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 IGFLR1Q9H665 355 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 MAP3K20Q9NYL2 800 aaKnown RBP12.42□□□□□ -0.42
CTNND1-235ENST00000533189 CD207Q9UJ71 328 aa12.42□□□□□ -0.42
CTNND1-235ENST00000533189 NEDD4P46934 1319 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 C5orf67F2Z3F1 127 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 GRM6O15303 877 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 RGS20O76081 388 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 CSPG5O95196 566 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 LGALS2P05162 132 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 CCND2P30279 289 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 HOXC8P31273 242 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 NT5C2P49902 561 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 MFAP1P55081 439 aaKnown RBP12.41□□□□□ -0.42
CTNND1-235ENST00000533189 SP2Q02086 613 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
CTNND1-235ENST00000533189 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
CTNND1-235ENST00000533189 PGM5Q15124 567 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 PKN1Q16512 942 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 STOX1Q6ZVD7 989 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 USP34Q70CQ2 3546 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 VSIG10LQ86VR7 867 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 SUGP1Q8IWZ8 645 aaKnown RBP12.41□□□□□ -0.42
CTNND1-235ENST00000533189 PPP2R3CQ969Q6 453 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 PRRX2Q99811 253 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 OSBPL7Q9BZF2 842 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 DOCK5Q9H7D0 1870 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
CTNND1-235ENST00000533189 ADGRA3Q8IWK6 1321 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 SALL3Q9BXA9 1300 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 ZFHX2Q9C0A1 2572 aaPredicted RBP12.4□□□□□ -0.42
CTNND1-235ENST00000533189 ZNF213O14771 459 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 ST18O60284 1047 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 KDM4AO75164 1064 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 NDUFV1P49821 464 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 GHRHRQ02643 423 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 PRSS33Q8NF86 280 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 PBXIP1Q96AQ6 731 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 ZSCAN10Q96SZ4 725 aaPredicted RBP12.4□□□□□ -0.42
CTNND1-235ENST00000533189 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 SETD4Q9NVD3 440 aa12.4□□□□□ -0.42
CTNND1-235ENST00000533189 TTC3P53804 2025 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 TMEM221A6NGB7 291 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 M0R296 226 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 OPLAHO14841 1288 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 TBX10O75333 385 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 MMP1P03956 469 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 HOXA13P31271 388 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-235ENST00000533189 ARHGAP4P98171 946 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 BTG3Q14201 252 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-235ENST00000533189 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 FAM26DQ5JW98 314 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 ANKRD45Q5TZF3 282 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 IL31RAQ8NI17 732 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 GPKOWQ92917 476 aaPredicted RBP eCLIP12.39□□□□□ -0.43
CTNND1-235ENST00000533189 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-235ENST00000533189 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 ZNF215Q9UL58 517 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-235ENST00000533189 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 CFAP54Q96N23 3096 aa12.39□□□□□ -0.43
CTNND1-235ENST00000533189 CACNA1HO95180 2353 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms