RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CHMLP26374 656 aa21.32■■□□□ 1
SSSCA1-206ENST00000531405 ERVK-21P61565 698 aa21.32■■□□□ 1
SSSCA1-206ENST00000531405 MRPS9P82933 396 aaKnown RBP21.32■■□□□ 1
SSSCA1-206ENST00000531405 RALYLQ86SE5 291 aaKnown RBP21.32■■□□□ 1
SSSCA1-206ENST00000531405 DBF4BQ8NFT6 615 aa21.32■■□□□ 1
SSSCA1-206ENST00000531405 ATP6V0A1Q93050 837 aa21.32■■□□□ 1
SSSCA1-206ENST00000531405 TGS1Q96RS0 853 aaKnown RBP21.32■■□□□ 1
SSSCA1-206ENST00000531405 TUT1Q9H6E5 874 aaKnown RBP21.32■■□□□ 1
SSSCA1-206ENST00000531405 RALGAPA2Q2PPJ7 1873 aa21.32■■□□□ 1
SSSCA1-206ENST00000531405 FRMPD4Q14CM0 1322 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 EMSYQ7Z589 1322 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 LOXHD1Q8IVV2 1947 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 TREHO43280 583 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 ANTXR2P58335 489 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 TRAF1Q13077 416 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 SEMA3FQ13275 785 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 NCOA7Q8NI08 942 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 RUFY2Q8WXA3 655 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 OSBPL7Q9BZF2 842 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 RTEL1Q9NZ71 1219 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 TELO2Q9Y4R8 837 aa21.31■■□□□ 1
SSSCA1-206ENST00000531405 NOP56O00567 594 aaKnown RBP21.3■■□□□ 1
SSSCA1-206ENST00000531405 HOXC8P31273 242 aa21.3■■□□□ 1
SSSCA1-206ENST00000531405 MKRN4PQ13434 485 aaPredicted RBP21.3■■□□□ 1
SSSCA1-206ENST00000531405 SART3Q15020 963 aaKnown RBP21.3■■□□□ 1
SSSCA1-206ENST00000531405 CYFIP1Q7L576 1253 aa21.3■■□□□ 1
SSSCA1-206ENST00000531405 MYOCDQ8IZQ8 938 aa21.3■■□□□ 1
SSSCA1-206ENST00000531405 RNPEPQ9H4A4 650 aa21.3■■□□□ 1
SSSCA1-206ENST00000531405 CTSHP09668 335 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 GNPTABQ3T906 1256 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 TRIM50Q86XT4 487 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 INPP4AQ96PE3 977 aaPredicted RBP21.29■■□□□ 1
SSSCA1-206ENST00000531405 C17orf80Q9BSJ5 609 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 MYL10Q9BUA6 226 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 LMCD1Q9NZU5 365 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 MYO7AQ13402 2215 aa21.29■■□□□ 1
SSSCA1-206ENST00000531405 SPATA31C2B4DYI2 1134 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 AMHP03971 560 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 ICAM3P32942 547 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 PLEKHG4Q58EX7 1191 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 IGDCC4Q8TDY8 1250 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 GPR20Q99678 358 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 SETD4Q9NVD3 440 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 INSL6Q9Y581 213 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 C5orf42Q9H799 3197 aa21.28■■□□□ 1
SSSCA1-206ENST00000531405 SGSM2O43147 1006 aa21.27■■□□□ 1
SSSCA1-206ENST00000531405 SP4Q02446 784 aa21.27■■□□□ 1
SSSCA1-206ENST00000531405 USP17L6PQ6QN14 398 aa21.27■■□□□ 1
SSSCA1-206ENST00000531405 METTL7BQ6UX53 244 aa21.27■■□□□ 1
SSSCA1-206ENST00000531405 MB21D2Q8IYB1 491 aaPredicted RBP21.27■■□□□ 1
SSSCA1-206ENST00000531405 USP26Q9BXU7 913 aa21.27■■□□□ 1
SSSCA1-206ENST00000531405 EPHX3Q9H6B9 360 aa21.27■■□□□ 1
SSSCA1-206ENST00000531405 FIBPO43427 364 aa21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 STAM2O75886 525 aa21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 HTRA4P83105 476 aaPredicted RBP21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 NEDD9Q14511 834 aa21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 UTP14CQ5TAP6 766 aaKnown RBP21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 ZNF654Q8IZM8 581 aa21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 FBXO22Q8NEZ5 403 aa21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 SMARCC2Q8TAQ2 1214 aa21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 LY9Q9HBG7 655 aa21.26■□□□□ 0.99
SSSCA1-206ENST00000531405 UPP2O95045 317 aa21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 SP7Q8TDD2 431 aaPredicted RBP21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 SEPT8Q92599 483 aa21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 KHSRPQ92945 711 aaKnown RBP eCLIP21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 RRP36Q96EU6 259 aaKnown RBP21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 SPZ1Q9BXG8 430 aa21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 C1QTNF1Q9BXJ1 281 aa21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 SUPT16HQ9Y5B9 1047 aaKnown RBP21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 RBM8AQ9Y5S9 174 aaKnown RBP21.25■□□□□ 0.99
SSSCA1-206ENST00000531405 MEIS2O14770 477 aa21.24■□□□□ 0.99
SSSCA1-206ENST00000531405 COL9A3Q14050 684 aaPredicted RBP21.24■□□□□ 0.99
SSSCA1-206ENST00000531405 PCNX4Q63HM2 1172 aa21.24■□□□□ 0.99
SSSCA1-206ENST00000531405 CMTR1Q8N1G2 835 aaKnown RBP21.24■□□□□ 0.99
SSSCA1-206ENST00000531405 CTCFLQ8NI51 663 aaPredicted RBP21.24■□□□□ 0.99
SSSCA1-206ENST00000531405 MAP4K1Q92918 833 aa21.24■□□□□ 0.99
SSSCA1-206ENST00000531405 UBE2ZQ9H832 354 aaPredicted RBP21.24■□□□□ 0.99
SSSCA1-206ENST00000531405 KIAA1671Q9BY89 1806 aa21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 PLEKHA8P1O95397 391 aa21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 IRX6P78412 446 aaPredicted RBP21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 ARHGAP4P98171 946 aa21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 LMBR1Q8WVP7 490 aa21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 CUL5Q93034 780 aa21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 ZNF215Q9UL58 517 aaPredicted RBP21.23■□□□□ 0.99
SSSCA1-206ENST00000531405 COL4A6Q14031 1691 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 CAND2O75155 1236 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 DDAH1O94760 285 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 GNAT1P11488 350 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 RXRAP19793 462 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 KIF5BP33176 963 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 ADAM17P78536 824 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 EPC2Q52LR7 807 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 SRBD1Q8N5C6 995 aaKnown RBP21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 TOP1MTQ969P6 601 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 YME1L1Q96TA2 773 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 MAP3K14Q99558 947 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 CD320Q9NPF0 282 aa21.22■□□□□ 0.99
SSSCA1-206ENST00000531405 SEC63Q9UGP8 760 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms