RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 FOXD2O60548 495 aaPredicted RBP7.12□□□□□ -1.27
USP47-209ENST00000530041 LRG1P02750 347 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 FAM153BP0C7A2 387 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 GNAT1P11488 350 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 ADAM9Q13443 819 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 HABP4Q5JVS0 413 aaKnown RBP7.12□□□□□ -1.27
USP47-209ENST00000530041 FAM209AQ5JX71 171 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 PRR31Q5SQ13 230 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 ZNF761Q86XN6 746 aaPredicted RBP7.12□□□□□ -1.27
USP47-209ENST00000530041 UHMK1Q8TAS1 419 aaKnown RBP7.12□□□□□ -1.27
USP47-209ENST00000530041 ADAMTS17Q8TE56 1095 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 PTPRN2Q92932 1015 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 MKL1Q969V6 931 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 ALG1Q9BT22 464 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 ADAM7Q9H2U9 754 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 USP40Q9NVE5 1235 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 SNTG2Q9NY99 539 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 TRAF6Q9Y4K3 522 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 NUB1Q9Y5A7 615 aa7.12□□□□□ -1.27
USP47-209ENST00000530041 NCANO14594 1321 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 FAM221BA6H8Z2 402 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 B8ZZF3 427 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 AQP7O14520 342 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 GJA9P57773 515 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 ZFYVE27Q5T4F4 411 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 CLEC4DQ8WXI8 215 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
USP47-209ENST00000530041 PRRG2O14669 202 aa7.1□□□□□ -1.27
USP47-209ENST00000530041 C6orf222P0C671 652 aaPredicted RBP7.1□□□□□ -1.27
USP47-209ENST00000530041 COL6A2P12110 1019 aa7.1□□□□□ -1.27
USP47-209ENST00000530041 SYN1P17600 705 aa7.1□□□□□ -1.27
USP47-209ENST00000530041 ZC3H12BQ5HYM0 836 aaKnown RBP7.1□□□□□ -1.27
USP47-209ENST00000530041 EXOC2Q96KP1 924 aa7.1□□□□□ -1.27
USP47-209ENST00000530041 TMEM209Q96SK2 561 aa7.1□□□□□ -1.27
USP47-209ENST00000530041 DHRS4Q9BTZ2 278 aa7.1□□□□□ -1.27
USP47-209ENST00000530041 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
USP47-209ENST00000530041 IPPKQ9H8X2 491 aa7.1□□□□□ -1.27
USP47-209ENST00000530041 NKRFO15226 690 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP47-209ENST00000530041 PAK1Q13153 545 aa7.09□□□□□ -1.27
USP47-209ENST00000530041 TUSC3Q13454 348 aa7.09□□□□□ -1.27
USP47-209ENST00000530041 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
USP47-209ENST00000530041 ERICH6BQ5W0A0 696 aa7.09□□□□□ -1.27
USP47-209ENST00000530041 MTDHQ86UE4 582 aaKnown RBP7.09□□□□□ -1.27
USP47-209ENST00000530041 CLIC6Q96NY7 704 aa7.09□□□□□ -1.27
USP47-209ENST00000530041 SRPK1Q96SB4 655 aaKnown RBP7.09□□□□□ -1.27
USP47-209ENST00000530041 LNPKQ9C0E8 428 aa7.09□□□□□ -1.27
USP47-209ENST00000530041 DSEQ9UL01 958 aa7.09□□□□□ -1.27
USP47-209ENST00000530041 PRICKLE3O43900 615 aaPredicted RBP7.08□□□□□ -1.28
USP47-209ENST00000530041 GABREP78334 506 aa7.08□□□□□ -1.28
USP47-209ENST00000530041 GRIN1Q05586 938 aa7.08□□□□□ -1.28
USP47-209ENST00000530041 RBM12BQ8IXT5 1001 aaKnown RBP7.08□□□□□ -1.28
USP47-209ENST00000530041 PMFBP1Q8TBY8 1022 aa7.08□□□□□ -1.28
USP47-209ENST00000530041 KISS1RQ969F8 398 aaPredicted RBP7.08□□□□□ -1.28
USP47-209ENST00000530041 ZSWIM3Q96MP5 696 aa7.08□□□□□ -1.28
USP47-209ENST00000530041 WRNIP1Q96S55 665 aa7.08□□□□□ -1.28
USP47-209ENST00000530041 DNAJC7Q99615 494 aa7.08□□□□□ -1.28
USP47-209ENST00000530041 WASF3Q9UPY6 502 aa7.08□□□□□ -1.28
USP47-209ENST00000530041 MRPS23Q9Y3D9 190 aaKnown RBP7.08□□□□□ -1.28
USP47-209ENST00000530041 NISCHQ9Y2I1 1504 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 DDX3XO00571 662 aaKnown RBP eCLIP7.07□□□□□ -1.28
USP47-209ENST00000530041 WNT9AO14904 365 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 CYP7B1O75881 506 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 LTFP02788 710 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 FAHP16930 419 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 ZNF28P17035 718 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 NAT1P18440 290 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 EPHA5P54756 1037 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 RGL3Q3MIN7 710 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 PAN2Q504Q3 1202 aaKnown RBP7.07□□□□□ -1.28
USP47-209ENST00000530041 MCTP2Q6DN12 878 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.07□□□□□ -1.28
USP47-209ENST00000530041 PROSER1Q86XN7 944 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 TXNDC5Q8NBS9 432 aaKnown RBP7.07□□□□□ -1.28
USP47-209ENST00000530041 SREK1Q8WXA9 508 aaKnown RBP7.07□□□□□ -1.28
USP47-209ENST00000530041 TELO2Q9Y4R8 837 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 PCDHA8Q9Y5H6 950 aa7.07□□□□□ -1.28
USP47-209ENST00000530041 GUCY1A3Q02108 690 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 KIAA2012Q0VF49 1180 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 RTP5Q14D33 572 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 UBXN11Q5T124 520 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 PRAMEF18Q5VWM3 479 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 TMC5Q6UXY8 1006 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 KCTD1Q719H9 257 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 FERMT3Q86UX7 667 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 JMYQ8N9B5 988 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 DDX1Q92499 740 aaKnown RBP7.06□□□□□ -1.28
USP47-209ENST00000530041 RBPJLQ9UBG7 517 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 DUSP10Q9Y6W6 482 aa7.06□□□□□ -1.28
USP47-209ENST00000530041 MROH6A6NGR9 719 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 ARVCFO00192 962 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 CELA3BP08861 270 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 IL13P35225 146 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 VASNQ6EMK4 673 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 PCDH19Q8TAB3 1148 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 SH3RF2Q8TEC5 729 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 FBXW5Q969U6 566 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 DLL4Q9NR61 685 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 CROTQ9UKG9 612 aa7.05□□□□□ -1.28
USP47-209ENST00000530041 TCRBV5S4A2TA0A5A2 114 aa7.04□□□□□ -1.28
USP47-209ENST00000530041 C9orf118A6NHY6 69 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms